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2
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Genome Announc. 2016 Jun 23;4(3):e00624-16. doi: 10.1128/genomeA.00624-16.
3
Genome Sequence of the Fish Pathogen Flavobacterium columnare Genomovar II Strain 94-081.鱼类病原菌柱状黄杆菌基因组II型菌株94-081的基因组序列
Genome Announc. 2016 May 26;4(3):e00430-16. doi: 10.1128/genomeA.00430-16.
4
Rainbow trout (Oncorhynchus mykiss) resistance to columnaris disease is heritable and favorably correlated with bacterial cold water disease resistance.虹鳟（Oncorhynchus mykiss）对柱状病的抗性具有遗传性，且与对细菌性冷水病的抗性呈正相关。
J Anim Sci. 2015 Apr;93(4):1546-54. doi: 10.2527/jas.2014-8566.
5
Intragenomic heterogeneity in the 16S rRNA genes of Flavobacterium columnare and standard protocol for genomovar assignment.柱状黄杆菌16S rRNA基因的基因组内异质性及基因组变种分类的标准方案
J Fish Dis. 2014 Jul;37(7):657-69. doi: 10.1111/jfd.12166. Epub 2013 Aug 20.
6
Columnaris disease in fish: a review with emphasis on bacterium-host interactions.鱼类柱状病：综述及重点关注细菌-宿主相互作用。
Vet Res. 2013 Apr 24;44(1):27. doi: 10.1186/1297-9716-44-27.
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Reproducible challenge model to investigate the virulence of Flavobacterium columnare genomovars in rainbow trout Oncorhynchus mykiss.用于研究柱状黄杆菌基因组变种对虹鳟（Oncorhynchus mykiss）毒力的可重复挑战模型。
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Genome sequence of the fish pathogen Flavobacterium columnare ATCC 49512.柱状屈挠杆菌 ATCC 49512 的基因组序列。
J Bacteriol. 2012 May;194(10):2763-4. doi: 10.1128/JB.00281-12.
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Flavobacterium columnare genomovar influences mortality in channel catfish (Ictalurus punctatus).柱状黄杆菌基因组变种影响斑点叉尾鮰（Ictalurus punctatus）的死亡率。
Vet Microbiol. 2008 Mar 18;127(3-4):353-9. doi: 10.1016/j.vetmic.2007.09.003. Epub 2007 Sep 18.
10
Host-specific association between Flavobacterium columnare genomovars and fish species.柱状黄杆菌基因组变种与鱼类物种之间的宿主特异性关联。
Syst Appl Microbiol. 2007 Dec;30(8):624-33. doi: 10.1016/j.syapm.2007.07.003. Epub 2007 Aug 16.

鱼类病原体CSF-298-10菌株的基因组序列草图

Draft Genome Sequence of the Fish Pathogen Strain CSF-298-10.

作者信息

Evenhuis Jason P, LaPatra Scott E, Graf Joerg

机构信息

U.S. Department of Agriculture, National Center for Cool and Cold Water Aquaculture, Agriculture Research Service, Kearneysville, West Virginia, USA

Clear Springs Foods Inc., Buhl, Idaho, USA.

出版信息

Genome Announc. 2017 Apr 13;5(15):e00173-17. doi: 10.1128/genomeA.00173-17.

DOI:10.1128/genomeA.00173-17
PMID:28408684
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5391422/
Abstract

We announce here the draft genome assembly of CSF-298-10, a strain isolated from an outbreak of columnaris disease at a commercial trout farm in Hagerman Valley, Idaho, USA. The complete genome consists of 13 contigs totaling 3,284,579 bp, with an average G+C content of 31.5% and 2,933 predicted coding genes.

摘要

我们在此公布CSF-298-10的基因组组装草图，该菌株是从美国爱达荷州哈格曼山谷一家商业鳟鱼养殖场爆发的柱状病疫情中分离出来的。完整基因组由13个重叠群组成，总计3,284,579 bp，平均G+C含量为31.5%，预测编码基因有2,933个。