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用二甲基亚砜处理的鼠伤寒沙门氏菌生物膜的消减蛋白质谱分析

Subtractive Protein Profiling of Salmonella typhimurium Biofilm Treated with DMSO.

作者信息

Yahya Mohd Fakharul Zaman Raja, Alias Zazali, Karsani Saiful Anuar

机构信息

Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.

Department of Biology, Faculty of Applied Sciences, Universiti Teknologi MARA, Shah Alam, Malaysia.

出版信息

Protein J. 2017 Aug;36(4):286-298. doi: 10.1007/s10930-017-9719-9.

Abstract

Salmonella typhimurium is an important biofilm-forming bacteria. It is known to be resistant to a wide range of antimicrobials. The present study was carried out to evaluate the effects of dimethyl sulfoxide (DMSO) against S. typhimurium biofilm and investigate whole-cell protein expression by biofilm cells following treatment with DMSO. Antibiofilm activities were assessed using pellicle assay, crystal violet assay, colony-forming unit counting and extracellular polymeric substance (EPS) matrix assay whilst differential protein expression was investigated using a combination of one dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis, tandem mass spectrometry and bioinformatics. Treatment with 32% DMSO inhibited pellicle formation, biofilm viability, biofilm biomass and several important components of EPS matrix. Subtractive protein profiling identified two unique protein bands (25.4 and 51.2 kDa) which were present only in control biofilm and not in 32% DMSO-treated biofilm. In turn, 29 and 46 proteins were successfully identified from the protein bands of 25.4 and 51.2 kDa respectively. Protein interaction network analysis identified several biological pathways to be affected, including glycolysis, PhoP-PhoQ phosphorelay signalling and flagellar biosynthesis. The present study suggests that DMSO may inhibit multiple biological pathways to control biofilm formation.

摘要

鼠伤寒沙门氏菌是一种重要的生物膜形成细菌。已知它对多种抗菌药物具有抗性。本研究旨在评估二甲基亚砜(DMSO)对鼠伤寒沙门氏菌生物膜的影响,并研究DMSO处理后生物膜细胞的全细胞蛋白表达。使用菌膜测定、结晶紫测定、菌落形成单位计数和胞外聚合物(EPS)基质测定来评估抗生物膜活性,同时使用一维十二烷基硫酸钠聚丙烯酰胺凝胶电泳、串联质谱和生物信息学相结合的方法来研究差异蛋白表达。用32%的DMSO处理可抑制菌膜形成、生物膜活力、生物膜生物量以及EPS基质的几个重要成分。消减蛋白图谱分析确定了两条独特的蛋白带(25.4和51.2 kDa),它们仅存在于对照生物膜中,而不存在于32% DMSO处理的生物膜中。相应地,分别从25.4和51.2 kDa的蛋白带中成功鉴定出29种和46种蛋白质。蛋白质相互作用网络分析确定了几个受影响的生物途径,包括糖酵解、PhoP-PhoQ磷酸转移信号传导和鞭毛生物合成。本研究表明,DMSO可能通过抑制多种生物途径来控制生物膜形成。

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