从欧洲山毛榉中分离出的卵菌病原体菌株LV007的基因组草图。
Draft genome of the oomycete pathogen strain LV007 isolated from European beech ().
作者信息
Grenville-Briggs Laura J, Kushwaha Sandeep K, Cleary Michelle R, Witzell Johanna, Savenkov Eugene I, Whisson Stephen C, Chawade Aakash, Vetukuri Ramesh R
机构信息
Department of Plant Protection biology, Swedish University of Agricultural Sciences, Alnarp, Sweden.
Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden.
出版信息
Genom Data. 2017 May 12;12:155-156. doi: 10.1016/j.gdata.2017.05.010. eCollection 2017 Jun.
Abstract
is a broad host range phytopathogenic oomycete. strain LV007 was isolated from a diseased European Beech () in Malmö, Sweden in 2016. The draft genome of strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.
摘要
是一种寄主范围广泛的植物病原卵菌。菌株LV007于2016年从瑞典马尔默一棵患病的欧洲山毛榉（）中分离得到。菌株LV007的基因组草图为67.81 Mb。它包含15,567个重叠群和21,876个预测的蛋白质编码基因。正如其他植物病原疫霉物种所报道的那样，鉴定出了包括RxLR和CRN家族在内的细胞质效应蛋白。基因组序列已保存在DDBJ/ENA/GenBank中，登录号为NBIJ00000000。本文描述的版本是版本NBIJ01000000。
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