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How open science helps researchers succeed.开放科学如何助力研究人员取得成功。
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Is preclinical data sharing the new norm?临床前数据共享是否成为新规范?
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The Changing Nature of Scientific Sharing and Withholding in Academic Life Sciences Research: Trends From National Surveys in 2000 and 2013.学术生命科学研究中科学共享与保留的性质变化:2000年和2013年全国调查的趋势
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Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury.用于临床前脊髓损伤和创伤性脑损伤发现的拓扑数据分析
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Pronounced species divergence in corticospinal tract reorganization and functional recovery after lateralized spinal cord injury favors primates.在脊髓损伤侧化后,皮质脊髓束重组和功能恢复方面明显的物种差异有利于灵长类动物。
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建立一个用于脊髓损伤研究的数据共享社区。

Developing a data sharing community for spinal cord injury research.

作者信息

Callahan Alison, Anderson Kim D, Beattie Michael S, Bixby John L, Ferguson Adam R, Fouad Karim, Jakeman Lyn B, Nielson Jessica L, Popovich Phillip G, Schwab Jan M, Lemmon Vance P

机构信息

Stanford Center for Biomedical Informatics Research, Stanford University, Stanford 94305, CA, USA.

Miami Project to Cure Paralysis, University of Miami School of Medicine, Miami 33136, FL, USA; Department of Neurological Surgery, University of Miami Miller School of Medicine, Miami 33136, FL, USA.

出版信息

Exp Neurol. 2017 Sep;295:135-143. doi: 10.1016/j.expneurol.2017.05.012. Epub 2017 May 30.

DOI:10.1016/j.expneurol.2017.05.012
PMID:28576567
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6448396/
Abstract

The rapid growth in data sharing presents new opportunities across the spectrum of biomedical research. Global efforts are underway to develop practical guidance for implementation of data sharing and open data resources. These include the recent recommendation of 'FAIR Data Principles', which assert that if data is to have broad scientific value, then digital representations of that data should be Findable, Accessible, Interoperable and Reusable (FAIR). The spinal cord injury (SCI) research field has a long history of collaborative initiatives that include sharing of preclinical research models and outcome measures. In addition, new tools and resources are being developed by the SCI research community to enhance opportunities for data sharing and access. With this in mind, the National Institute of Neurological Disorders and Stroke (NINDS) at the National Institutes of Health (NIH) hosted a workshop on October 5-6, 2016 in Bethesda, MD, in collaboration with the Open Data Commons for Spinal Cord Injury (ODC-SCI) titled "Preclinical SCI Data: Creating a FAIR Share Community". Workshop invitees were nominated by the workshop steering committee (co-chairs: ARF and VPL; members: AC, KDA, MSB, KF, LBJ, PGP, JMS), to bring together junior and senior level experts including preclinical and basic SCI researchers from academia and industry, data science and bioinformatics experts, investigators with expertise in other neurological disease fields, clinical researchers, members of the SCI community, and program staff representing federal and private funding agencies. The workshop and ODC-SCI efforts were sponsored by the International Spinal Research Trust (ISRT), the Rick Hansen Institute, Wings for Life, the Craig H. Neilsen Foundation and NINDS. The number of attendees was limited to ensure active participation and feedback in small groups. The goals were to examine the current landscape for data sharing in SCI research and provide a path to its future. Below are highlights from the workshop, including perspectives on the value of data sharing in SCI research, workshop participant perspectives and concerns, descriptions of existing resources and actionable directions for further engaging the SCI research community in a model that may be applicable to many other areas of neuroscience. This manuscript is intended to share these initial findings with the broader research community, and to provide talking points for continued feedback from the SCI field, as it continues to move forward in the age of data sharing.

摘要

数据共享的快速发展为生物医学研究的各个领域带来了新机遇。全球正在努力制定数据共享和开放数据资源实施的实用指南。这些举措包括最近提出的“FAIR数据原则”,该原则认为,如果数据要具有广泛的科学价值,那么该数据的数字表示形式应是可查找、可访问、可互操作和可重用的(FAIR)。脊髓损伤(SCI)研究领域有着长期的合作倡议历史,包括共享临床前研究模型和结果测量方法。此外,SCI研究界正在开发新的工具和资源,以增加数据共享和获取的机会。考虑到这一点,美国国立卫生研究院(NIH)的国立神经疾病与中风研究所(NINDS)于2016年10月5日至6日在马里兰州贝塞斯达与脊髓损伤开放数据共享库(ODC-SCI)合作举办了一次研讨会,主题为“临床前SCI数据:创建一个FAIR共享社区”。研讨会的受邀者由研讨会指导委员会提名(联合主席:ARF和VPL;成员:AC、KDA、MSB、KF、LBJ、PGP、JMS),汇集了初级和高级专家,包括来自学术界和产业界的临床前和基础SCI研究人员、数据科学和生物信息学专家、其他神经疾病领域的专家研究人员、临床研究人员、SCI社区成员以及代表联邦和私人资助机构的项目工作人员。该研讨会和ODC-SCI的工作由国际脊髓研究信托基金(ISRT)、里克·汉森研究所、生命之翼、克雷格·H·尼尔森基金会和NINDS赞助。参会人数有限,以确保小组内的积极参与和反馈。目标是审视SCI研究中数据共享的当前状况,并为其未来发展提供一条路径。以下是研讨会的要点,包括对SCI研究中数据共享价值的看法、研讨会参与者的观点和担忧、现有资源的描述以及让SCI研究界进一步参与到一个可能适用于神经科学许多其他领域的模式中的可行方向。本手稿旨在与更广泛的研究社区分享这些初步发现,并提供讨论要点,以便在SCI领域继续在数据共享时代前进的过程中持续获得反馈。