Barbieri Rémi, Mekni Rania, Levasseur Anthony, Chabrière Eric, Signoli Michel, Tzortzis Stéfan, Aboudharam Gérard, Drancourt Michel
Aix-Marseille Université, URMITE, CNRS, Faculté de Médecine IHU Méditerranée-Infection, Marseille, France.
Aix-Marseille Université, EFS-CNRS, Marseille, France.
PLoS One. 2017 Jul 26;12(7):e0180552. doi: 10.1371/journal.pone.0180552. eCollection 2017.
Chemical decomposition and fragmentation may limit the detection of ancient host and microbial DNA while some proteins can be detected for extended periods of time. We applied paleoproteomics on 300-year-old dental pulp specimens recovered from 16 individuals in two archeological funeral sites in France, comprising one documented plague site and one documented plague-negative site. The dental pulp paleoproteome of the 16 teeth comprised 439 peptides representative of 30 proteins of human origin and 211 peptides representative of 27 proteins of non-human origin. Human proteins consisted of conjunctive tissue and blood proteins including IgA immunoglobulins. Four peptides were indicative of three presumable Yersinia pestis proteins detected in 3/8 dental pulp specimens from the plague-positive site but not in the eight dental pulp specimens collected in the plague-negative site. Paleoproteomics applied to the dental pulp is a new and innovative approach to screen ancient individuals for the detection of blood-borne pathogens and host inflammatory response.
化学分解和碎片化可能会限制对古代宿主和微生物DNA的检测,而一些蛋白质却能在较长时间内被检测到。我们对从法国两个考古墓葬遗址的16个人身上获取的300年前的牙髓样本进行了古蛋白质组学研究,其中一个遗址有鼠疫记录,另一个遗址记录为无鼠疫。这16颗牙齿的牙髓古蛋白质组包含439条代表30种人类来源蛋白质的肽段和211条代表27种非人类来源蛋白质的肽段。人类蛋白质包括结缔组织和血液蛋白质,其中有IgA免疫球蛋白。有四条肽段表明在来自鼠疫阳性遗址的3/8份牙髓样本中检测到了三种可能的鼠疫耶尔森菌蛋白质,但在鼠疫阴性遗址采集的八份牙髓样本中未检测到。应用于牙髓的古蛋白质组学是一种全新的创新方法,用于筛查古代个体以检测血源性病原体和宿主炎症反应。