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CorB介导的头对头聚酮化合物融合的结构基础

Structural basis of head to head polyketide fusion by CorB.

作者信息

Zocher Georg, Vilstrup Joachim, Heine Daniel, Hallab Asis, Goralski Emilie, Hertweck Christian, Stahl Mark, Schäberle Till F, Stehle Thilo

机构信息

Interfaculty Institute of Biochemistry , University Tübingen , Hoppe-Seyler-Str. 4 , 72076 Tübingen , Germany . Email:

Department of Molecular Biology and Genetics , Aarhus University , Gustav Wieds Vej 10C , DK 8000 Aarhus C , Denmark.

出版信息

Chem Sci. 2015 Nov 1;6(11):6525-6536. doi: 10.1039/c5sc02488a. Epub 2015 Aug 6.

Abstract

Corallopyronin A is a polyketide derived from the myxobacterium with potent antibiotic features. The gene cluster responsible for the biosynthesis of corallopyronin A has been described recently, and it was proposed that CorB acts as a ketosynthase to interconnect two polyketide chains in a rare head-to-head condensation reaction. We determined the structure of CorB, the interconnecting polyketide synthase, to high resolution and found that CorB displays a thiolase fold. Site-directed mutagenesis showed that the catalytic triad consisting of a cysteine, a histidine and an asparagine is crucial for catalysis, and that this triad shares similarities with the triad found in HMG-CoA synthases. We synthesized a substrate mimic to derivatize purified CorB and confirmed substrate attachment by ESI-MS. Structural analysis of the complex yielded an electron density-based model for the polyketide chain and showed that the unusually wide, T-shaped active site is able to accommodate two polyketides simultaneously. Our structural analysis provides a platform for understanding the unusual head-to-head polyketide-interconnecting reaction catalyzed by CorB.

摘要

珊瑚吡喃菌素A是一种源自粘细菌的聚酮化合物,具有强大的抗生素特性。最近已描述了负责珊瑚吡喃菌素A生物合成的基因簇,并提出CorB作为酮合成酶,以罕见的头对头缩合反应连接两条聚酮链。我们以高分辨率确定了连接聚酮合酶CorB的结构,发现CorB具有硫解酶折叠。定点诱变表明,由半胱氨酸、组氨酸和天冬酰胺组成的催化三联体对催化至关重要,并且该三联体与HMG-CoA合酶中的三联体具有相似性。我们合成了一种底物模拟物来衍生纯化的CorB,并通过电喷雾质谱法确认了底物附着。该复合物的结构分析产生了基于电子密度的聚酮链模型,并表明异常宽的T形活性位点能够同时容纳两种聚酮化合物。我们的结构分析为理解由CorB催化的异常头对头聚酮连接反应提供了一个平台。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1870/5506619/b0700f7ebe75/c5sc02488a-f1.jpg

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