a The RNA Institute , State University of New York , Albany , NY , USA.
b Department of Biology , State University of New York , Albany , NY , USA.
RNA Biol. 2018;15(4-5):537-553. doi: 10.1080/15476286.2017.1356562. Epub 2017 Sep 21.
A simple post-transcriptional modification of tRNA, deamination of adenosine to inosine at the first, or wobble, position of the anticodon, inspired Francis Crick's Wobble Hypothesis 50 years ago. Many more naturally-occurring modifications have been elucidated and continue to be discovered. The post-transcriptional modifications of tRNA's anticodon domain are the most diverse and chemically complex of any RNA modifications. Their contribution with regards to chemistry, structure and dynamics reveal individual and combined effects on tRNA function in recognition of cognate and wobble codons. As forecast by the Modified Wobble Hypothesis 25 years ago, some individual modifications at tRNA's wobble position have evolved to restrict codon recognition whereas others expand the tRNA's ability to read as many as four synonymous codons. Here, we review tRNA wobble codon recognition using specific examples of simple and complex modification chemistries that alter tRNA function. Understanding natural modifications has inspired evolutionary insights and possible innovation in protein synthesis.
tRNA 的一种简单转录后修饰,即在反密码子的第一位置(即摆动位置)上将腺苷脱氨为肌苷,这一现象启发了弗朗西斯·克里克(Francis Crick)在 50 年前提出的摆动假说。此后,人们发现了更多的天然存在的修饰。tRNA 反密码子区域的转录后修饰是所有 RNA 修饰中最多样化和化学结构最复杂的。它们在化学、结构和动力学方面的贡献揭示了单个和组合修饰对 tRNA 识别同源和摆动密码子的功能的影响。正如 25 年前的修正摆动假说所预测的那样,tRNA 摆动位置的一些单个修饰已经进化为限制密码子的识别,而其他修饰则扩展了 tRNA 读取多达四个同义密码子的能力。在这里,我们将通过改变 tRNA 功能的简单和复杂修饰化学的具体实例来回顾 tRNA 摆动密码子识别。对天然修饰的理解激发了对蛋白质合成的进化见解和可能的创新。