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一种整合系统生物学方法鉴定出TRIM25是乳腺癌转移的关键决定因素。

An Integrated Systems Biology Approach Identifies TRIM25 as a Key Determinant of Breast Cancer Metastasis.

作者信息

Walsh Logan A, Alvarez Mariano J, Sabio Erich Y, Reyngold Marsha, Makarov Vladimir, Mukherjee Suranjit, Lee Ken-Wing, Desrichard Alexis, Turcan Şevin, Dalin Martin G, Rajasekhar Vinagolu K, Chen Shuibing, Vahdat Linda T, Califano Andrea, Chan Timothy A

机构信息

Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Department of Systems Biology, Columbia University, New York, NY, USA; DarwinHealth, Inc., New York, NY, USA.

出版信息

Cell Rep. 2017 Aug 15;20(7):1623-1640. doi: 10.1016/j.celrep.2017.07.052.

DOI:10.1016/j.celrep.2017.07.052
PMID:28813674
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5985663/
Abstract

At the root of most fatal malignancies are aberrantly activated transcriptional networks that drive metastatic dissemination. Although individual metastasis-associated genes have been described, the complex regulatory networks presiding over the initiation and maintenance of metastatic tumors are still poorly understood. There is untapped value in identifying therapeutic targets that broadly govern coordinated transcriptional modules dictating metastatic progression. Here, we reverse engineered and interrogated a breast cancer-specific transcriptional interaction network (interactome) to define transcriptional control structures causally responsible for regulating genetic programs underlying breast cancer metastasis in individual patients. Our analyses confirmed established pro-metastatic transcription factors, and they uncovered TRIM25 as a key regulator of metastasis-related transcriptional programs. Further, in vivo analyses established TRIM25 as a potent regulator of metastatic disease and poor survival outcome. Our findings suggest that identifying and targeting keystone proteins, like TRIM25, can effectively collapse transcriptional hierarchies necessary for metastasis formation, thus representing an innovative cancer intervention strategy.

摘要

大多数致命恶性肿瘤的根源是驱动转移扩散的异常激活的转录网络。尽管已经描述了与转移相关的个别基因,但对于主导转移性肿瘤起始和维持的复杂调控网络仍知之甚少。识别广泛控制决定转移进展的协调转录模块的治疗靶点具有尚未开发的价值。在此,我们通过反向工程构建并研究了一个乳腺癌特异性转录相互作用网络(相互作用组),以定义因果负责调节个体患者乳腺癌转移潜在遗传程序的转录控制结构。我们的分析证实了已确立的促转移转录因子,并且发现TRIM25是转移相关转录程序的关键调节因子。此外,体内分析确定TRIM25是转移性疾病和不良生存结果的有效调节因子。我们的研究结果表明,识别并靶向像TRIM25这样的关键蛋白,可以有效地瓦解转移形成所需转录层次结构,从而代表一种创新的癌症干预策略。

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The first five years of single-cell cancer genomics and beyond.
海七鳃鳗视网膜的分子特征揭示了视网膜细胞类型的进化起源。
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