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威氏脱硫八叠球菌新种和食烷脱硫八叠球菌新种,从海洋沉积物中分离出的可降解烃类的硫酸盐还原菌及脱硫八叠球菌属的修订描述

Desulfosarcina widdelii sp. nov. and Desulfosarcina alkanivorans sp. nov., hydrocarbon-degrading sulfate-reducing bacteria isolated from marine sediment and emended description of the genus Desulfosarcina.

作者信息

Watanabe Miho, Higashioka Yuriko, Kojima Hisaya, Fukui Manabu

机构信息

The Institute of Low Temperature Science, Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo 060-0819, Japan.

Postdoctoral Research Fellow of the Japan Society for the Promotion of Science, Chiyoda-ku, Tokyo 102-8471, Japan.

出版信息

Int J Syst Evol Microbiol. 2017 Aug;67(8):2994-2997. doi: 10.1099/ijsem.0.002062. Epub 2017 Aug 18.

Abstract

In previous studies, two hydrocarbon-degrading sulfate-reducing bacteria, strains PP31T and PL12T, were obtained from oil-polluted marine sediments of Shuaiba, Kuwait. They had been reported as organisms capable of anaerobic degradation of p-xylene and n-alkanes, respectively. The 16S rRNA gene sequence of strain PP31T showed 98.8 % sequence similarities to that of Desulfosarcina variabilis'Montpellier'T. Strains PL12T had 97.8 % of sequence similarity to Desulfosarcina ovata oXys1T. They both have been partially characterized, but not been validly published as new species of the genus Desulfosarcina. In this study, additional characterizations of these strains were made to describe them as two new species of the genus Desulfosarcina. Major cellular fatty acids of strain PP31T were C15 : 0 (25.9 %) and anteiso-C15 : 0 (22.3 %), whereas those of strain PL12T were C15 : 0 (21.3 %), C16 : 0 (17.8 %) and anteiso-15 : 0 (11.6 %). The phylogenetic tree based on 16S rRNA gene revealed that these isolates should not be classified as any of the known species in the genus Desulfosarcina. On the basis of phenotypic and phylogenetic analyses, these two sulfate reducers are proposed to form two novel species of the genus Desulfosarcina : Desulfosarcina widdelii sp. nov. (PP31T=JCM 31729T=DSM 103921T) and Desulfosarcina alkanivorans sp. nov. (PL12T=JCM 31728T=DSM 103901T). In addition, emended description of the genus Desulfosarcina is presented in this study.

摘要

在先前的研究中,从科威特舒艾拜受石油污染的海洋沉积物中获得了两种降解烃类的硫酸盐还原菌,PP31T菌株和PL12T菌株。据报道,它们分别是能够厌氧降解对二甲苯和正构烷烃的微生物。PP31T菌株的16S rRNA基因序列与可变脱硫弧菌“蒙彼利埃”T的序列相似度为98.8%。PL12T菌株与卵形脱硫弧菌oXys1T的序列相似度为97.8%。它们都已进行了部分特征描述,但尚未作为脱硫弧菌属的新物种有效发表。在本研究中,对这些菌株进行了进一步的特征描述,以将它们描述为脱硫弧菌属的两个新物种。PP31T菌株的主要细胞脂肪酸为C15 : 0(25.9%)和anteiso-C15 : 0(22.3%),而PL12T菌株的主要细胞脂肪酸为C15 : 0(21.3%)、C16 : 0(17.8%)和anteiso-15 : 0(11.6%)。基于16S rRNA基因的系统发育树表明,这些分离株不应归类为脱硫弧菌属中的任何已知物种。基于表型和系统发育分析,这两种硫酸盐还原菌被提议形成脱硫弧菌属的两个新物种:维氏脱硫弧菌新种(PP31T=JCM 31729T=DSM 103921T)和食烷脱硫弧菌新种(PL12T=JCM 31728T=DSM 103901T)。此外,本研究还给出了脱硫弧菌属的修订描述。

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