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新种凡辛德双歧杆菌,从棉顶狨(Saguinus imperator)粪便中分离得到。

Bifidobacterium vansinderenii sp. nov., isolated from faeces of emperor tamarin (Saguinus imperator).

作者信息

Duranti Sabrina, Mangifesta Marta, Lugli Gabriele Andrea, Turroni Francesca, Anzalone Rosaria, Milani Christian, Mancabelli Leonardo, Ossiprandi Maria Cristina, Ventura Marco

机构信息

Department of Chemistry, Laboratory of Probiogenomics, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy.

GenProbio srl, Parma, Italy.

出版信息

Int J Syst Evol Microbiol. 2017 Oct;67(10):3987-3995. doi: 10.1099/ijsem.0.002243. Epub 2017 Sep 12.

Abstract

A novel Bifidobacterium strain, Tam10B, i.e. LMG 30126, was isolated from emperor tamarin (Saguinus imperator). Cells were Gram-positive, non-motile, non-sporulating, non-haemolytic, facultative anaerobic and fructose 6-phosphate phosphoketolase-positive. Phylogenetic analyses based on 16S rRNA genes as well as multilocus sequences (representing hsp60, rpoB, dnaJ, dnaG and clpC genes) and the core genome revealed that Bifidobacterium Tam10B exhibited close phylogenetic relatedness to Bifidobacterium tissieri DSM 100201. Comparative analysis of 16S rRNA gene sequences confirmed the phylogenetic results showing the highest gene sequence identity with strain B. tissieri DSM 100201 (96.5 %). Furthermore, genotyping based on the genome sequence of Tam 10B, in combination with phenotypic analyses, clearly showed that strain Tam10B is distinct from each of the type strains of the so far recognized Bifidobacterium species. The type strain Tam10B (=LMG 30126=CCUG 70655) represents a novel species, for which the name Bifidobacteriumvansinderenii sp. nov is proposed.

摘要

从皇柽柳猴(Saguinus imperator)中分离出一种新型双歧杆菌菌株Tam10B,即LMG 30126。细胞革兰氏阳性,不运动,不产芽孢,不溶血,兼性厌氧,且6-磷酸果糖磷酸酮醇酶呈阳性。基于16S rRNA基因以及多位点序列(代表hsp60、rpoB、dnaJ、dnaG和clpC基因)和核心基因组的系统发育分析表明,双歧杆菌Tam10B与蒂氏双歧杆菌DSM 100201具有密切的系统发育相关性。16S rRNA基因序列的比较分析证实了系统发育结果,显示与蒂氏双歧杆菌DSM 100201菌株的基因序列同一性最高(96.5%)。此外,基于Tam 10B基因组序列的基因分型与表型分析相结合,清楚地表明Tam10B菌株与目前已确认的双歧杆菌属各模式菌株均不同。模式菌株Tam10B(=LMG 30126=CCUG 70655)代表一个新物种,为此提出了新名称“范辛德雷尼双歧杆菌(Bifidobacterium vansinderenii sp. nov)”。

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