Huber Katharina J, Geppert Alicia M, Groß Uwe, Luckner Manja, Wanner Gerhard, Cooper Paul, Abakah John, Janssen Iryna, Overmann Jörg
Department of Microbial Ecology and Diversity Research, Leibniz Institute DSMZ - German Collection of Micoorganisms and Cell Cultures, Braunschweig, Germany.
University Medical Center Göttingen, Institute of Medical Microbiology, Göttingen, Germany.
Int J Syst Evol Microbiol. 2017 Nov;67(11):4487-4493. doi: 10.1099/ijsem.0.002318. Epub 2017 Sep 25.
Members of the class Blastocatellia are frequently found in soils with a neutral and (slightly) basic pH where they constitute an important fraction of the microbial community. A novel representative of the class Blastocatellia was isolated from a Ghanaian soil and was characterized in detail. Cells of strain A24_SHP_-5_238 were non-motile rods that divided by binary fission and formed orange to salmon-coloured colonies on agar plates. Strain A24_SHP_-5_238 tolerated pH values of pH 6.0-9.0 (best growth at pH 7.0-8.5) and temperature values of 8-45 °C (best growth at 33-40 °C). It grew chemo-organoheterotrophically on several sugars, a few amino acids, organic acids and different complex protein substrates. In addition, strain A24_SHP_-5_238 was able to use nitrate as an alternative electron acceptor in the absence of oxygen. Major fatty acids of A24_SHP_-5_238 were iso-C15 : 0, summed feature 1 (C13 : 0 3-OH/iso-C15 : 1 H), summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), anteiso-C17 : 0 and anteiso-C15 : 0. The major quinone was MK-8, and the DNA G+C content was 53.5 mol%. The closest described phylogenetic relatives were Aridibacter famidurans A22_HD_4H and Aridibacter kavangonensis Ac_23_E3 with a 16S rRNA gene sequence identity of 97.6 and 97.2 %, respectively. The DNA-DNA hybridization values (<28.5 %) confirmed that A24_SHP_-5_238 represents a novel species within the genus Aridibacter. Based on its morphological, physiological and molecular characteristics, we propose the novel species Aridibacter nitratireducens sp. nov. (type strain A24_SHP_-5_238 = DSM 102177 = CECT 9235).
芽生卡特氏菌纲的成员经常出现在pH值为中性和(微)碱性的土壤中,它们是微生物群落的重要组成部分。从加纳土壤中分离出了芽生卡特氏菌纲的一个新代表菌株,并对其进行了详细表征。菌株A24_SHP_-5_238的细胞为不运动的杆菌,通过二分分裂进行繁殖,在琼脂平板上形成橙色至鲑鱼色的菌落。菌株A24_SHP_-5_238能耐受pH值为6.0 - 9.0(在pH值7.0 - 8.5时生长最佳)以及温度为8 - 45°C(在33 - 40°C时生长最佳)的环境。它能在多种糖类、一些氨基酸、有机酸和不同的复合蛋白质底物上进行化能有机异养生长。此外,在无氧条件下,菌株A24_SHP_-5_238能够利用硝酸盐作为替代电子受体。A24_SHP_-5_238的主要脂肪酸为异-C15 : 0、特征性总和1(C13 : 0 3-OH/异-C15 : 1 H)、特征性总和3(C16 : 1ω7c/C16 : 1ω6c)、anteiso-C17 : 0和anteiso-C15 : 0。主要醌类为MK-8,DNA的G+C含量为53.5 mol%。已描述的最相近的系统发育亲缘关系菌为干旱杆菌A22_HD_4H和卡万戈干旱杆菌Ac_23_E3,其16S rRNA基因序列同一性分别为97.6%和97.2%。DNA-DNA杂交值(<28.5%)证实A24_SHP_-5_238代表干旱杆菌属内的一个新物种。基于其形态、生理和分子特征,我们提出新物种还原硝酸盐干旱杆菌(Aridibacter nitratireducens sp. nov.)(模式菌株A24_SHP_-5_238 = DSM 102177 = CECT 9235)。