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白令海考氏菌新种,一种从白令海分离出的嗜冷细菌。

Colwellia beringensis sp. nov., a psychrophilic bacterium isolated from the Bering Sea.

作者信息

Zhang Cong, Guo Wenbin, Wang Yuguang, Chen Xinhua

机构信息

Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration, Xiamen 361005, PR China.

Fujian Collaborative Innovation Center for Exploitation and Utilization of Marine Biological Resources, Xiamen 361005, PR China.

出版信息

Int J Syst Evol Microbiol. 2017 Dec;67(12):5102-5107. doi: 10.1099/ijsem.0.002423. Epub 2017 Oct 25.

Abstract

A Gram stain-negative, motile and rod-shaped bacterial strain, designated NB097-1, was isolated from a marine sediment sample collected from the Bering Sea, and subjected to a polyphasic taxonomic study. Strain NB097-1 grew at 0-25 °C, with an optimum growth temperature of 10-13 °C. Phylogenetic trees reconstructed based on 16S rRNA gene sequences indicated that strain NB097-1 belonged to the genus Colwellia. Strain NB097-1 exhibited 16S rRNA gene sequence similarities of 98.6, 98.5, 98.0, 97.2 and 96.8 % with the type strains of Colwellia mytili, C. sediminilitoris, C. aestuarii, C. polaris and C. chukchiensis, respectively. Strain NB097-1 had Q-8 as the major respiratory quinone and contained summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c) and C16 : 0 as the major fatty acids. The major polar lipids detected in strain NB097-1 were phosphatidylglycerol and phosphatidylethanolamine. The genomic DNA G+C content of strain NB097-1 was 38.5 mol%, and its average nucleotide identity values with the type strains of C. mytili, C. sediminilitoris, C. aestuarii, C. polaris and C. chukchiensis were 77.30, 78.99, 78.82, 80.66 and 75.77 %, respectively. On the basis of phenotypic, chemotaxonomic and phylogenetic properties, together with average nucleotide identity value data, strain NB097-1 represents a novel species of the genus Colwellia, for which the name Colwellia beringensis sp. nov. is proposed. The type strain is NB097-1 (=MCCC 1A11668=KCTC 52554).

摘要

从白令海采集的海洋沉积物样本中分离出一株革兰氏染色阴性、具运动性的杆状细菌菌株,命名为NB097 - 1,并对其进行了多相分类研究。菌株NB097 - 1在0 - 25°C下生长,最适生长温度为10 - 13°C。基于16S rRNA基因序列重建的系统发育树表明,菌株NB097 - 1属于科尔韦氏菌属。菌株NB097 - 1与贻贝科尔韦氏菌、沉积物科尔韦氏菌、河口科尔韦氏菌、极地科尔韦氏菌和楚科奇科尔韦氏菌的模式菌株的16S rRNA基因序列相似性分别为98.6%、98.5%、98.0%、97.2%和96.8%。菌株NB097 - 1以Q - 8作为主要呼吸醌,主要脂肪酸为特征性总和3(C16:1ω7c和/或C16:1ω6c)和C16:0。在菌株NB097 - 1中检测到的主要极性脂类为磷脂酰甘油和磷脂酰乙醇胺。菌株NB097 - 1的基因组DNA G + C含量为38.5 mol%,其与贻贝科尔韦氏菌、沉积物科尔韦氏菌、河口科尔韦氏菌、极地科尔韦氏菌和楚科奇科尔韦氏菌模式菌株的平均核苷酸同一性值分别为77.30%、78.99%、78.82%、80.66%和75.77%。基于表型、化学分类和系统发育特性以及平均核苷酸同一性值数据,菌株NB097 - 1代表科尔韦氏菌属的一个新物种,为此提出白令海科尔韦氏菌新种,模式菌株为NB097 - 1(= MCCC 1A11668 = KCTC 52554)。

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