Helicase SPRNTing through the nanopore.
作者信息
Caldwell Colleen C, Spies Maria
机构信息
Department of Biochemistry, University of Iowa Carver College of Medicine, Iowa City, IA 52242
Department of Biochemistry, University of Iowa Carver College of Medicine, Iowa City, IA 52242.
出版信息
Proc Natl Acad Sci U S A. 2017 Nov 7;114(45):11809-11811. doi: 10.1073/pnas.1716866114. Epub 2017 Oct 24.
Abstract
摘要
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本文引用的文献
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Proc Natl Acad Sci U S A. 2017 Nov 7;114(45):11932-11937. doi: 10.1073/pnas.1711282114. Epub 2017 Oct 16.
2
Subangstrom Measurements of Enzyme Function Using a Biological Nanopore, SPRNT.使用生物纳米孔SPRNT对酶功能进行亚埃级测量。
Methods Enzymol. 2017;582:387-414. doi: 10.1016/bs.mie.2016.09.038. Epub 2016 Dec 7.
3
Single-Molecule Characterization of DNA-Protein Interactions Using Nanopore Biosensors.使用纳米孔生物传感器对DNA-蛋白质相互作用进行单分子表征
Methods Enzymol. 2017;582:353-385. doi: 10.1016/bs.mie.2016.08.010. Epub 2016 Nov 9.
4
Nanopore development at Oxford Nanopore.牛津纳米孔公司的纳米孔技术发展
Nat Biotechnol. 2016 Aug 9;34(8):810-1. doi: 10.1038/nbt.3622.
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