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可溶性甲烷单加氧酶 Q 中间态的高能量分辨率荧光探测 X 射线吸收。

High-Energy-Resolution Fluorescence-Detected X-ray Absorption of the Q Intermediate of Soluble Methane Monooxygenase.

机构信息

Max Planck Institute for Chemical Energy Conversion , Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany.

出版信息

J Am Chem Soc. 2017 Dec 13;139(49):18024-18033. doi: 10.1021/jacs.7b09560. Epub 2017 Dec 1.

Abstract

Kα high-energy-resolution fluorescence detected X-ray absorption spectroscopy (HERFD XAS) provides a powerful tool for overcoming the limitations of conventional XAS to identify the electronic structure and coordination environment of metalloprotein active sites. Herein, Fe Kα HERFD XAS is applied to the diiron active site of soluble methane monooxygenase (sMMO) and to a series of high-valent diiron model complexes, including diamond-core Fe(μ-O)(L)] (3) and open-core (O═Fe-O-Fe(OH)(L) (4) models (where, L = tris(3,5-dimethyl-4-methoxypyridyl-2-methyl)amine) (TPA*)). Pronounced differences in the HERFD XAS pre-edge energies and intensities are observed for the open versus closed FeO cores in the model compounds. These differences are reproduced by time-dependent density functional theory (TDDFT) calculations and allow for the pre-edge energies and intensity to be directly correlated with the local active site geometric and electronic structure. A comparison of the model complex HERFD XAS data to that of MMOH (the key intermediate in methane oxidation) is supportive of an open-core structure. Specifically, the large pre-edge area observed for MMOH may be rationalized by invoking an open-core structure with a terminal Fe═O motif, though further modulations of the core structure due to the protein environment cannot be ruled out. The present study thus motivates the need for additional experimental and theoretical studies to unambiguously assess the active site conformation of MMOH.

摘要

Kα 高能量分辨率荧光探测 X 射线吸收光谱(HERFD XAS)为克服传统 XAS 识别金属蛋白活性位点的电子结构和配位环境的局限性提供了有力工具。本文将 Fe Kα HERFD XAS 应用于可溶性甲烷单加氧酶(sMMO)的双核铁活性位点和一系列高价双核铁模型配合物,包括金刚石核 [Fe(μ-O)(L)] (ClO) (3) 和开核 [(O═Fe-O-Fe(OH)(L)] (ClO) (4) 模型(其中,L = 三(3,5-二甲基-4-甲氧基吡啶-2-甲基)胺)(TPA*))。在模型化合物中,开核与闭核 FeO 核的 HERFD XAS 预边缘能量和强度存在明显差异。这些差异通过时间依赖密度泛函理论(TDDFT)计算得到重现,并允许将预边缘能量和强度与局部活性位点的几何和电子结构直接相关联。模型复合物 HERFD XAS 数据与 MMOH(甲烷氧化的关键中间体)的比较支持开核结构。具体而言,对于 MMOH 观察到的大预边缘面积可以通过具有末端 Fe═O 基序的开核结构来合理化,尽管不能排除由于蛋白质环境引起的核心结构的进一步调制。本研究因此需要进行更多的实验和理论研究,以明确评估 MMOH 的活性位点构象。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a3fc/5729100/79a31414ce3a/nihms921183f1.jpg

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