1 Division of Medical Genetics.
2 Department of Biostatistics.
Ann Am Thorac Soc. 2018 Apr;15(4):440-448. doi: 10.1513/AnnalsATS.201706-451OC.
Cystic fibrosis, like primary ciliary dyskinesia, is an autosomal recessive disorder characterized by abnormal mucociliary clearance and obstructive lung disease. We hypothesized that genes underlying the development or function of cilia may modify lung disease severity in persons with cystic fibrosis.
To test this hypothesis, we compared variants in 93 candidate genes in both upper and lower tertiles of lung function in a large cohort of children and adults with cystic fibrosis with those of a population control dataset.
Variants within candidate genes were tested for association using the SKAT-O test, comparing cystic fibrosis cases defined by poor (n = 127) or preserved (n = 127) lung function with population controls (n = 3,269 or 3,148, respectively). Associated variants were then tested for association with related phenotypes in independent datasets.
Variants in DNAH14 and DNAAF3 were associated with poor lung function in cystic fibrosis, whereas variants in DNAH14 and DNAH6 were associated with preserved lung function in cystic fibrosis. Associations between DNAH14 and lung function were replicated in disease-related phenotypes characterized by obstructive lung disease in adults.
Genetic variants within DNAH6, DNAH14, and DNAAF3 are associated with variation in lung function among persons with cystic fibrosis.
囊性纤维化和原发性纤毛运动障碍一样,都是常染色体隐性遗传病,其特征为黏液纤毛清除功能异常和阻塞性肺疾病。我们推测,纤毛发育或功能相关的基因可能会影响囊性纤维化患者的肺部疾病严重程度。
为了验证这一假说,我们比较了囊性纤维化患者肺功能较高和较低三分位的 93 个候选基因中的变异,这些患者来自一个大型的儿童和成年患者队列,同时还比较了这些变异与人群对照数据集的差异。
使用 SKAT-O 检验比较了候选基因内的变异,比较了肺功能较差(n=127)或较好(n=127)的囊性纤维化病例与人群对照(分别为 3269 例和 3148 例)。然后,对相关表型进行了独立数据集的关联分析。
囊性纤维化患者中 DNAH14 和 DNAAF3 的变异与肺功能较差相关,而 DNAH14 和 DNAH6 的变异与囊性纤维化患者的肺功能较好相关。在成人中,DNAH14 与阻塞性肺疾病相关表型之间的关联得到了复制。
囊性纤维化患者中 DNAH6、DNAH14 和 DNAAF3 内的遗传变异与肺功能变化有关。