Andreani Julien, Khalil Jacques Y B, Baptiste Emeline, Hasni Issam, Michelle Caroline, Raoult Didier, Levasseur Anthony, La Scola Bernard
Aix Marseille Université, IRD, APHM, MEPHI, IHU-Méditerranée Infection, Marseille, France.
Centre National de la Recherche Scientifique, Marseille, France.
Front Microbiol. 2018 Jan 22;8:2643. doi: 10.3389/fmicb.2017.02643. eCollection 2017.
Giant viruses continue to invade the world of virology, in gigantic genome sizes and various particles shapes. Strains discoveries and metagenomic studies make it possible to reveal the complexity of these microorganisms, their origins, ecosystems and putative roles. We isolated from a rat stool sample a new giant virus "Orpheovirus IHUMI-LCC2," using as host cell. In this paper, we describe the main genomic features and replicative cycle of Orpheovirus IHUMI-LCC2. It possesses a circular genome exceeding 1.4 Megabases with 25% G+C content and ovoidal-shaped particles ranging from 900 to 1300 nm. Particles are closed by at least one thick membrane in a single ostiole-like shape in their apex. Phylogenetic analysis and the reciprocal best hit for Orpheovirus show a connection to the proposed family. However, some genomic characteristics bear witness to a completely divergent evolution for Orpheovirus IHUMI-LCC2 when compared to Cedratviruses or Pithoviruses.
巨型病毒凭借其巨大的基因组规模和多样的颗粒形状,持续闯入病毒学领域。菌株的发现和宏基因组研究使得揭示这些微生物的复杂性、起源、生态系统及假定作用成为可能。我们以 为宿主细胞,从一份大鼠粪便样本中分离出一种新型巨型病毒“俄耳甫斯病毒IHUMI-LCC2”。在本文中,我们描述了俄耳甫斯病毒IHUMI-LCC2的主要基因组特征和复制周期。它拥有一个超过140万个碱基对的环状基因组,G+C含量为25%,其卵形颗粒大小在900至1300纳米之间。颗粒顶端以单一小孔状的至少一层厚膜封闭。对俄耳甫斯病毒的系统发育分析和互作最佳匹配显示它与拟 科存在联系。然而,与塞德拉病毒或髓病毒相比,俄耳甫斯病毒IHUMI-LCC2的一些基因组特征表明其经历了完全不同的进化过程。