• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

ML35的全基因组序列

Complete Genome Sequence of ML35.

作者信息

Casale Angeline, Clark Stephanie, Grasso Melissa, Kryschuk Marta, Ritzer Lukas, Trudeau Madyson, Williams Laura E

机构信息

Department of Biology, Providence College, Providence, Rhode Island, USA.

Department of Biology, Providence College, Providence, Rhode Island, USA

出版信息

Genome Announc. 2018 Feb 15;6(7):e00034-18. doi: 10.1128/genomeA.00034-18.

DOI:10.1128/genomeA.00034-18
PMID:29449382
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5814495/
Abstract

We report here the complete genome sequence of strain ML35. We assembled PacBio reads into a single closed contig with 169× mean coverage and then polished this contig using Illumina MiSeq reads, yielding a 4,918,774-bp sequence with 50.8% GC content.

摘要

我们在此报告菌株ML35的完整基因组序列。我们将PacBio测序读数组装成一个单一的封闭重叠群，平均覆盖度为169倍，然后使用Illumina MiSeq测序读数对该重叠群进行抛光，得到一个长度为4,918,774 bp、GC含量为50.8%的序列。

相似文献

1
Complete Genome Sequence of ML35.ML35的全基因组序列
Genome Announc. 2018 Feb 15;6(7):e00034-18. doi: 10.1128/genomeA.00034-18.
2
Complete Genome Sequence of sp. Strain NC02, Isolated from Soil.从土壤中分离得到的[具体物种名称]菌株NC02的全基因组序列 。（你提供的原文中“sp.”处缺少具体物种名称）
Genome Announc. 2018 Feb 15;6(7):e00033-18. doi: 10.1128/genomeA.00033-18.
3
Complete Genome Sequence of Strain ABC1, Isolated from Soil.从土壤中分离出的ABC1菌株的全基因组序列
Microbiol Resour Announc. 2020 Sep 24;9(39):e00775-20. doi: 10.1128/MRA.00775-20.
4
Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis.引起新生儿早发型败血症的序列类型131多重耐药性大肠杆菌菌株SCB34的基因组序列
Genome Announc. 2014 Jun 12;2(3):e00514-14. doi: 10.1128/genomeA.00514-14.
5
Genome and Plasmid Sequences of KV7, an Extended-Spectrum β-Lactamase Isolate Derived from Feces of a Healthy Pig.KV7的基因组和质粒序列，KV7是一种从健康猪粪便中分离出的超广谱β-内酰胺酶菌株。
Genome Announc. 2017 Sep 21;5(38):e00595-17. doi: 10.1128/genomeA.00595-17.
6
The complete genome of JM101 assembled with a combination of Nanopore and Illumina platforms.使用纳米孔和Illumina平台相结合的方法组装了JM101的完整基因组。
Microbiol Resour Announc. 2024 Feb 15;13(2):e0097323. doi: 10.1128/MRA.00973-23. Epub 2024 Jan 16.
7
Evaluation and Validation of Assembling Corrected PacBio Long Reads for Microbial Genome Completion via Hybrid Approaches.通过混合方法组装校正后的PacBio长读段以完成微生物基因组的评估与验证
PLoS One. 2015 Dec 7;10(12):e0144305. doi: 10.1371/journal.pone.0144305. eCollection 2015.
8
Complete Genome Sequence of sp. Strain SGAir0471, Isolated from Singapore Air Samples.从新加坡空气样本中分离出的 sp. 菌株 SGAir0471 的全基因组序列
Microbiol Resour Announc. 2019 Nov 21;8(47):e00960-19. doi: 10.1128/MRA.00960-19.
9
First Draft Genome Sequence of Leishmania (Viannia) lainsoni Strain 216-34, Isolated from a Peruvian Clinical Case.从秘鲁临床病例中分离出的莱什曼原虫（维阿尼亚种）兰氏亚种216 - 34株的基因组序列初稿
Microbiol Resour Announc. 2019 Feb 7;8(6). doi: 10.1128/MRA.01524-18. eCollection 2019 Feb.
10
PacBio But Not Illumina Technology Can Achieve Fast, Accurate and Complete Closure of the High GC, Complex Two-Chromosome Genome.PacBio技术而非Illumina技术能够实现对高GC含量、复杂的双染色体基因组的快速、准确且完整的封闭。
Front Microbiol. 2017 Aug 2;8:1448. doi: 10.3389/fmicb.2017.01448. eCollection 2017.

引用本文的文献

1
A streamlined method to determine the antibiotic resistance of plaque-forming predatory bacteria.一种用于确定形成菌斑的捕食性细菌抗生素抗性的简化方法。
Front Microbiol. 2025 Aug 19;16:1582371. doi: 10.3389/fmicb.2025.1582371. eCollection 2025.
2
Combined Use of Antimicrobial Peptides with Antiseptics against Multidrug-Resistant Bacteria: Pros and Cons.抗菌肽与防腐剂联合用于对抗多重耐药细菌：利弊
Pharmaceutics. 2023 Jan 14;15(1):291. doi: 10.3390/pharmaceutics15010291.
3
Variation in genome content and predatory phenotypes between sp. NC01 isolated from soil and type strain HD100.从土壤中分离的 sp. NC01 与模式株 HD100 之间基因组内容和捕食表型的差异。
Microbiology (Reading). 2019 Dec;165(12):1315-1330. doi: 10.1099/mic.0.000861. Epub 2019 Oct 8.

本文引用的文献

1
Prey Range and Genome Evolution of Predatory Bacteria from an Estuary.河口捕食性细菌的猎物范围与基因组进化
mSphere. 2018 Jan 10;3(1). doi: 10.1128/mSphere.00508-17. eCollection 2018 Jan-Feb.
2
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.Pilon：一种用于全面微生物变异检测和基因组组装改进的集成工具。
PLoS One. 2014 Nov 19;9(11):e112963. doi: 10.1371/journal.pone.0112963. eCollection 2014.
3
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.非杂交、基于长读长 SMRT 测序数据的完成微生物基因组组装。
Nat Methods. 2013 Jun;10(6):563-9. doi: 10.1038/nmeth.2474. Epub 2013 May 5.
4
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data.SolexaQA：快速评估 Illumina 第二代测序数据的质量。
BMC Bioinformatics. 2010 Sep 27;11:485. doi: 10.1186/1471-2105-11-485.
5
The Sequence Alignment/Map format and SAMtools.序列比对/映射格式和 SAMtools。
Bioinformatics. 2009 Aug 15;25(16):2078-9. doi: 10.1093/bioinformatics/btp352. Epub 2009 Jun 8.
6
Fast and accurate short read alignment with Burrows-Wheeler transform.使用Burrows-Wheeler变换进行快速准确的短读比对。
Bioinformatics. 2009 Jul 15;25(14):1754-60. doi: 10.1093/bioinformatics/btp324. Epub 2009 May 18.
7
Gepard: a rapid and sensitive tool for creating dotplots on genome scale.Gepard：一种在基因组规模上创建点阵图的快速且灵敏的工具。
Bioinformatics. 2007 Apr 15;23(8):1026-8. doi: 10.1093/bioinformatics/btm039. Epub 2007 Feb 19.
8
[Galactoside-permease of Escherichia coli].[大肠杆菌的半乳糖苷通透酶]
Ann Inst Pasteur (Paris). 1956 Dec;91(6):829-57.
9
EMBOSS: the European Molecular Biology Open Software Suite.EMBOSS：欧洲分子生物学开放软件套件。
Trends Genet. 2000 Jun;16(6):276-7. doi: 10.1016/s0168-9525(00)02024-2.
10
Genetic studies of the lac repressor. XIV. Analysis of 4000 altered Escherichia coli lac repressors reveals essential and non-essential residues, as well as "spacers" which do not require a specific sequence.乳糖阻遏物的遗传学研究。十四。对4000种改变的大肠杆菌乳糖阻遏物的分析揭示了必需和非必需残基，以及不需要特定序列的“间隔区”。
J Mol Biol. 1994 Jul 29;240(5):421-33. doi: 10.1006/jmbi.1994.1458.