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模式产油藻类CCMP1894的全基因组序列

Complete Genome Sequence of the Model Oleaginous Alga CCMP1894.

作者信息

Schwartz Ariel S, Brown Rob, Ajjawi Imad, McCarren Jay, Atilla Suzan, Bauman Nick, Richardson Toby H

机构信息

Synthetic Genomics, La Jolla, California, USA.

Synthetic Genomics, La Jolla, California, USA

出版信息

Genome Announc. 2018 Feb 15;6(7):e01448-17. doi: 10.1128/genomeA.01448-17.

DOI:10.1128/genomeA.01448-17
PMID:29449398
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5814478/
Abstract

The model oleaginous alga was completely sequenced using a combination of optical mapping and next-generation sequencing technologies to generate one of the most complete eukaryotic genomes published to date. The assembled genome is 30.7 Mb long.

摘要

利用光学图谱和新一代测序技术相结合的方法，对模式产油藻类进行了全基因组测序，得到了迄今为止公布的最完整的真核生物基因组之一。组装后的基因组长度为30.7兆碱基对。

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Nat Biotechnol. 2017 Jul;35(7):647-652. doi: 10.1038/nbt.3865. Epub 2017 Jun 19.
3
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