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BioPepDB:一个用于食物来源生物活性肽的综合数据平台。

BioPepDB: an integrated data platform for food-derived bioactive peptides.

机构信息

a Department of Bioinformatics, College of Life Sciences , Zhejiang University , Hangzhou , China.

b LKK Health Products Group, Infinitus Co. Ltd , Guangzhou , China.

出版信息

Int J Food Sci Nutr. 2018 Dec;69(8):963-968. doi: 10.1080/09637486.2018.1446916. Epub 2018 Mar 12.

DOI:10.1080/09637486.2018.1446916
PMID:29529902
Abstract

Food-derived bioactive peptides play critical roles in regulating most biological processes and have considerable biological, medical and industrial importance. However, a large number of active peptides data, including sequence, function, source, commercial product information, references and other information are poorly integrated. BioPepDB is a searchable database of food-derived bioactive peptides and their related articles, including more than four thousand bioactive peptide entries. Moreover, BioPepDB provides modules of prediction and hydrolysis-simulation for discovering novel peptides. It can serve as a reference database to investigate the function of different bioactive peptides. BioPepDB is available at http://bis.zju.edu.cn/biopepdbr/ . The web page utilises Apache, PHP5 and MySQL to provide the user interface for accessing the database and predict novel peptides. The database itself is operated on a specialised server.

摘要

食物来源的生物活性肽在调节大多数生物过程中起着关键作用,具有重要的生物学、医学和工业意义。然而,大量的活性肽数据,包括序列、功能、来源、商业产品信息、参考文献等信息都没有很好地整合在一起。BioPepDB 是一个可搜索的食物来源的生物活性肽及其相关文章数据库,包括四千多个生物活性肽条目。此外,BioPepDB 还提供了预测和水解模拟模块,用于发现新的肽。它可以作为一个参考数据库,用于研究不同生物活性肽的功能。BioPepDB 可在 http://bis.zju.edu.cn/biopepdbr/ 获得。该网页利用 Apache、PHP5 和 MySQL 为访问数据库和预测新肽提供用户界面。数据库本身在专门的服务器上运行。

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