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基于神经网络的发育能力具备或不具备的小鼠完全成熟卵母细胞的鉴定

A Neural Network-Based Identification of Developmentally Competent or Incompetent Mouse Fully-Grown Oocytes.

作者信息

Cavalera Federica, Zanoni Mario, Merico Valeria, Bui Thi Thu Hien, Belli Martina, Fassina Lorenzo, Garagna Silvia, Zuccotti Maurizio

机构信息

Laboratorio di Biologia dello Sviluppo, Dipartimento di Biologia e Biotecnologie "Lazzaro Spallanzani", University of Pavia.

Laboratorio di Biologia dello Sviluppo, Dipartimento di Biologia e Biotecnologie "Lazzaro Spallanzani", University of Pavia; Institute of Biotechnology, University of Helsinki.

出版信息

J Vis Exp. 2018 Mar 3(133):56668. doi: 10.3791/56668.

DOI:10.3791/56668
PMID:29553524
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5931424/
Abstract

Infertility clinics would benefit from the ability to select developmentally competent vs. incompetent oocytes using non-invasive procedures, thus improving the overall pregnancy outcome. We recently developed a classification method based on microscopic live observations of mouse oocytes during their in vitro maturation from the germinal vesicle (GV) to the metaphase II stage, followed by the analysis of the cytoplasmic movements occurring during this time-lapse period. Here, we present detailed protocols of this procedure. Oocytes are isolated from fully-grown antral follicles and cultured for 15 h inside a microscope equipped for time-lapse analysis at 37 °C and 5% CO2. Pictures are taken at 8 min intervals. The images are analyzed using the Particle Image Velocimetry (PIV) method that calculates, for each oocyte, the profile of Cytoplasmic Movement Velocities (CMVs) occurring throughout the culture period. Finally, the CMVs of each single oocyte are fed through a mathematical classification tool (Feed-forward Artificial Neural Network, FANN), which predicts the probability of a gamete to be developmentally competent or incompetent with an accuracy of 91.03%. This protocol, set up for the mouse, could now be tested on oocytes of other species, including humans.

摘要

不孕不育诊所若能通过非侵入性程序筛选出发育能力正常与发育能力异常的卵母细胞,将从中受益,从而改善整体妊娠结局。我们最近开发了一种分类方法,该方法基于对小鼠卵母细胞从生发泡(GV)期到中期II期体外成熟过程的显微实时观察,随后分析在此延时期间发生的细胞质运动。在此,我们展示该程序的详细方案。从完全成熟的窦状卵泡中分离出卵母细胞,并在配备延时分析功能的显微镜下于37°C和5%二氧化碳环境中培养15小时。每隔8分钟拍摄一次照片。使用粒子图像测速(PIV)方法分析图像,该方法为每个卵母细胞计算整个培养期间发生的细胞质运动速度(CMV)曲线。最后,将每个单个卵母细胞的CMV输入一个数学分类工具(前馈人工神经网络,FANN),该工具预测配子发育能力正常或异常的概率,准确率为91.03%。这个为小鼠建立的方案现在可以在包括人类在内的其他物种的卵母细胞上进行测试。

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本文引用的文献

1
Cytoplasmic movement profiles of mouse surrounding nucleolus and not-surrounding nucleolus antral oocytes during meiotic resumption.减数分裂恢复过程中小鼠围绕核仁和不围绕核仁的腔前卵泡卵母细胞的细胞质运动情况
Mol Reprod Dev. 2017 May;84(5):356-362. doi: 10.1002/mrd.22788. Epub 2017 Mar 14.
2
On Training Efficiency and Computational Costs of a Feed Forward Neural Network: A Review.前馈神经网络的训练效率与计算成本综述
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3
Transcriptome based identification of mouse cumulus cell markers that predict the developmental competence of their enclosed antral oocytes.基于转录组的鉴定小鼠卵丘细胞标记物,预测其包裹的窦卵泡卵母细胞的发育能力。
BMC Genomics. 2013 Jun 7;14:380. doi: 10.1186/1471-2164-14-380.
4
Phospholipase C-ζ-induced Ca2+ oscillations cause coincident cytoplasmic movements in human oocytes that failed to fertilize after intracytoplasmic sperm injection.PLC-ζ 诱导的 Ca2+ 振荡导致人卵母细胞在胞质内注射后未能受精时发生一致的细胞质运动。
Fertil Steril. 2012 Mar;97(3):742-7. doi: 10.1016/j.fertnstert.2011.12.013. Epub 2012 Jan 2.
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Nat Commun. 2011 Aug 9;2:417. doi: 10.1038/ncomms1424.
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What does it take to make a developmentally competent mammalian egg?要使哺乳动物的卵子具有发育能力需要什么条件?
Hum Reprod Update. 2011 Jul-Aug;17(4):525-40. doi: 10.1093/humupd/dmr009. Epub 2011 Mar 28.
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Predictive value of oocyte morphology in human IVF: a systematic review of the literature.卵母细胞形态对人类 IVF 的预测价值:文献系统评价。
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Chromatin configurations in the germinal vesicle of mammalian oocytes.哺乳动物卵母细胞生发泡中的染色质构型。
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10
Contribution of the oocyte nucleus and cytoplasm to the determination of meiotic and developmental competence in mice.小鼠卵母细胞核与细胞质对减数分裂和发育能力决定的贡献。
Hum Reprod. 2008 Jun;23(6):1377-84. doi: 10.1093/humrep/den096. Epub 2008 Mar 25.