Institute of Bioinformatics, University Münster, Niels-Stensen Strasse 14, Münster 48149, Germany.
Laboratory of Bioenergetics, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University.
Int J Biol Sci. 2018 Feb 12;14(3):306-320. doi: 10.7150/ijbs.23869. eCollection 2018.
Amoebozoans are in many aspects interesting research objects, as they combine features of single-cell organisms with complex signaling and defense systems, comparable to multicellular organisms. is a cosmopolitan species and developed diverged feeding abilities and strong anti-bacterial resistance; is a parasitic amoeba, who underwent massive gene loss and its genome is almost twice smaller than that of . Nevertheless, both species prosper, demonstrating fitness to their specific environments. Here we compare transcriptomes of and with application of orthologs' search and gene ontology to learn how different life strategies influence genome evolution and restructuring of physiology demonstrates great metabolic activity and plasticity, while reveals several interesting features in its translational machinery, cytoskeleton, antioxidant protection, and nutritional behavior. In addition, we suggest new features in physiology that may explain its successful colonization of human colon and may facilitate medical research.
阿米巴动物在许多方面都是有趣的研究对象,因为它们结合了单细胞生物的特征与复杂的信号和防御系统,类似于多细胞生物。 是一种世界性的物种,具有不同的摄食能力和较强的抗细菌能力; 是一种寄生性阿米巴虫,经历了大规模的基因丢失,其基因组几乎是 的两倍小。然而,这两个物种都很繁荣,证明了它们对特定环境的适应性。在这里,我们比较了 和 的转录组,应用直系同源搜索和基因本体论来了解不同的生活策略如何影响基因组进化和生理结构的重组。结果表明,前者具有很强的代谢活性和可塑性,而后者在其翻译机制、细胞骨架、抗氧化保护和营养行为方面显示出了一些有趣的特征。此外,我们还提出了 生理上的新特征,这可能解释了它成功地定植在人类结肠,并可能有助于医学研究。