He Wei-Di, Gao Jie, Dou Tong-Xin, Shao Xiu-Hong, Bi Fang-Cheng, Sheng Ou, Deng Gui-Ming, Li Chun-Yu, Hu Chun-Hua, Liu Ji-Hong, Zhang Sheng, Yang Qiao-Song, Yi Gan-Jun
Key Laboratory of Horticultural Plant Biology of the Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, China.
Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Front Plant Sci. 2018 Mar 8;9:282. doi: 10.3389/fpls.2018.00282. eCollection 2018.
Banana is an important tropical fruit with high economic value. One of the main cultivars ('Cavendish') is susceptible to low temperatures, while another closely related specie ('Dajiao') has considerably higher cold tolerance. We previously reported that some membrane proteins appear to be involved in the cold tolerance of Dajiao bananas via an antioxidation mechanism. To investigate the early cold stress response of Dajiao, here we applied comparative membrane proteomics analysis for both cold-sensitive Cavendish and cold-tolerant Dajiao bananas subjected to cold stress at 10°C for 0, 3, and 6 h. A total of 2,333 and 1,834 proteins were identified in Cavendish and Dajiao, respectively. Subsequent bioinformatics analyses showed that 692 Cavendish proteins and 524 Dajiao proteins were predicted to be membrane proteins, of which 82 and 137 differentially abundant membrane proteins (DAMPs) were found in Cavendish and Dajiao, respectively. Interestingly, the number of DAMPs with increased abundance following 3 h of cold treatment in Dajiao (80) was seven times more than that in Cavendish (11). Gene ontology molecular function analysis of DAMPs for Cavendish and Dajiao indicated that they belong to eight categories including hydrolase activity, binding, transporter activity, antioxidant activity, etc., but the number in Dajiao is twice that in Cavendish. Strikingly, we found peroxidases (PODs) and aquaporins among the protein groups whose abundance was significantly increased after 3 h of cold treatment in Dajiao. Some of the PODs and aquaporins were verified by reverse-transcription PCR, multiple reaction monitoring, and green fluorescent protein-based subcellular localization analysis, demonstrating that the global membrane proteomics data are reliable. By combining the physiological and biochemical data, we found that membrane-bound Peroxidase 52 and Peroxidase P7, and aquaporins (MaPIP1;1, MaPIP1;2, MaPIP2;4, MaPIP2;6, MaTIP1;3) are mainly involved in decreased lipid peroxidation and maintaining leaf cell water potential, which appear to be the key cellular adaptations contributing to the cold tolerance of Dajiao. This membrane proteomics study provides new insights into cold stress tolerance mechanisms of banana, toward potential applications for ultimate genetic improvement of cold tolerance in banana.
香蕉是一种具有重要经济价值的热带水果。其主要栽培品种之一(“卡文迪什”)对低温敏感,而另一个近缘种(“大蕉”)的耐寒性则强得多。我们之前报道过,一些膜蛋白似乎通过抗氧化机制参与了大蕉的耐寒性。为了研究大蕉对低温胁迫的早期响应,我们对低温敏感的卡文迪什香蕉和耐寒的大蕉在10°C下分别处理0、3和6小时后进行了比较膜蛋白质组学分析。在卡文迪什香蕉和大蕉中分别鉴定出了2333种和1834种蛋白质。随后的生物信息学分析表明,预测卡文迪什香蕉中有692种蛋白质和大蕉中有524种蛋白质为膜蛋白,其中分别在卡文迪什香蕉和大蕉中发现了82种和137种差异丰富的膜蛋白(DAMP)。有趣的是,大蕉在低温处理3小时后丰度增加的DAMP数量(80种)是卡文迪什香蕉(11种)的7倍。对卡文迪什香蕉和大蕉的DAMP进行基因本体分子功能分析表明,它们属于包括水解酶活性、结合、转运活性、抗氧化活性等在内的8个类别,但大蕉中的数量是卡文迪什香蕉的两倍。引人注目的是,我们在大蕉低温处理3小时后丰度显著增加的蛋白质组中发现了过氧化物酶(POD)和水通道蛋白。通过逆转录PCR、多反应监测和基于绿色荧光蛋白的亚细胞定位分析对部分POD和水通道蛋白进行了验证,证明了整体膜蛋白质组学数据是可靠的。结合生理生化数据,我们发现膜结合过氧化物酶52和过氧化物酶P7以及水通道蛋白(MaPIP1;1、MaPIP1;2、MaPIP2;4、MaPIP2;6、MaTIP1;3)主要参与降低脂质过氧化和维持叶片细胞水势,这似乎是大蕉耐寒性的关键细胞适应性变化。这项膜蛋白质组学研究为香蕉的低温胁迫耐受机制提供了新的见解,有助于香蕉耐寒性最终遗传改良的潜在应用。