Buckel Wolfgang, Thauer Rudolf K
Laboratory for Microbiology, Faculty of Biology, Philipps-Universität Marburg, Marburg, Germany.
Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Front Microbiol. 2018 Mar 14;9:401. doi: 10.3389/fmicb.2018.00401. eCollection 2018.
Flavin-based electron bifurcation is a newly discovered mechanism, by which a hydride electron pair from NAD(P)H, coenzyme FH, H, or formate is split by flavoproteins into one-electron with a more negative reduction potential and one with a more positive reduction potential than that of the electron pair. Via this mechanism microorganisms generate low- potential electrons for the reduction of ferredoxins (Fd) and flavodoxins (Fld). The first example was described in 2008 when it was found that the butyryl-CoA dehydrogenase-electron-transferring flavoprotein complex (Bcd-EtfAB) of couples the endergonic reduction of ferredoxin (E' = -420 mV) with NADH (-320 mV) to the exergonic reduction of crotonyl-CoA to butyryl-CoA (-10 mV) with NADH. The discovery was followed by the finding of an electron-bifurcating Fd- and NAD-dependent [FeFe]-hydrogenase (HydABC) in (2009), Fd-dependent transhydrogenase (NfnAB) in various bacteria and archaea (2010), Fd- and H-dependent heterodisulfide reductase (MvhADG-HdrABC) in methanogenic archaea (2011), Fd- and NADH-dependent caffeyl-CoA reductase (CarCDE) in (2013), Fd- and NAD-dependent formate dehydrogenase (HylABC-FdhF2) in (2013), Fd- and NADP-dependent [FeFe]-hydrogenase (HytA-E) in (2013), Fd(?)- and NADH-dependent methylene-tetrahydrofolate reductase (MetFV-HdrABC-MvhD) in (2014), Fd- and NAD-dependent lactate dehydrogenase (LctBCD) in (2015), Fd- and FH-dependent heterodisulfide reductase (HdrA2B2C2) in (2017), and Fd- and NADH-dependent ubiquinol reductase (FixABCX) in (2017). The electron-bifurcating flavoprotein complexes known to date fall into four groups that have evolved independently, namely those containing EtfAB (CarED, LctCB, FixBA) with bound FAD, a NuoF homolog (HydB, HytB, or HylB) harboring FMN, NfnB with bound FAD, or HdrA harboring FAD. All these flavoproteins are cytoplasmic except for the membrane-associated protein FixABCX. The organisms-in which they have been found-are strictly anaerobic microorganisms except for the aerobe . The electron-bifurcating complexes are involved in a variety of processes such as butyric acid fermentation, methanogenesis, acetogenesis, anaerobic lactate oxidation, dissimilatory sulfate reduction, anaerobic- dearomatization, nitrogen fixation, and CO fixation. They contribute to energy conservation via the energy-converting ferredoxin: NAD reductase complex Rnf or the energy-converting ferredoxin-dependent hydrogenase complex Ech. This Review describes how this mechanism was discovered.
基于黄素的电子分叉是一种新发现的机制,通过该机制,来自NAD(P)H、辅酶FH、H或甲酸的氢化物电子对被黄素蛋白分裂成一个具有更负还原电位的单电子和一个具有比该电子对更正还原电位的单电子。通过这种机制,微生物产生低电位电子用于还原铁氧化还原蛋白(Fd)和黄素氧化还原蛋白(Fld)。第一个例子在2008年被描述,当时发现丁酸辅酶A脱氢酶-电子传递黄素蛋白复合物(Bcd-EtfAB)将铁氧化还原蛋白(E' = -420 mV)与NADH(-320 mV)的吸能还原与巴豆酰辅酶A与NADH的放能还原为丁酰辅酶A(-10 mV)偶联起来。该发现之后,2009年在[具体物种]中发现了一种电子分叉的依赖Fd和NAD的[FeFe]氢化酶(HydABC),在各种细菌和古菌中发现了依赖Fd的转氢酶(NfnAB)(2010年),在产甲烷古菌中发现了依赖Fd和H的异二硫还原酶(MvhADG-HdrABC)(2011年),在[具体物种]中发现了依赖Fd和NADH的咖啡酰辅酶A还原酶(CarCDE)(2013年),在[具体物种]中发现了依赖Fd和NAD的甲酸脱氢酶(HylABC-FdhF2)(2013年),在[具体物种]中发现了依赖Fd和NADP的[FeFe]氢化酶(HytA-E)(2013年),在[具体物种]中发现了依赖Fd(?)和NADH的亚甲基四氢叶酸还原酶(MetFV-HdrABC-MvhD)(2014年),在[具体物种]中发现了依赖Fd和NAD的乳酸脱氢酶(LctBCD)(2015年),在[具体物种]中发现了依赖Fd和FH的异二硫还原酶(HdrA2B2C2)(2017年),以及在[具体物种]中发现了依赖Fd和NADH的泛醌还原酶(FixABCX)(2017年)。迄今为止已知的电子分叉黄素蛋白复合物分为四组,它们是独立进化的,即那些含有结合FAD的EtfAB(CarED、LctCB、FixBA)、含有FMN的NuoF同源物(HydB、HytB或HylB)、结合FAD的NfnB或含有FAD的HdrA。除了与膜相关的蛋白FixABCX外,所有这些黄素蛋白都是胞质的。发现它们的生物除了需氧菌[具体物种]外都是严格厌氧微生物。电子分叉复合物参与多种过程,如丁酸发酵、产甲烷作用、乙酸生成、厌氧乳酸氧化、异化硫酸盐还原、厌氧脱芳构化、固氮和CO固定。它们通过能量转换铁氧化还原蛋白:NAD还原酶复合物Rnf或能量转换依赖铁氧化还原蛋白的氢化酶复合物Ech促进能量守恒。本综述描述了该机制是如何被发现的。