六株麻疹病毒的全基因组序列
Complete Genome Sequences of Six Measles Virus Strains.
作者信息
Phan My V T, Schapendonk Claudia M E, Oude Munnink Bas B, Koopmans Marion P G, de Swart Rik L, Cotten Matthew
机构信息
Department of Viroscience, Erasmus MC, Rotterdam, The Netherlands.
Department of Viroscience, Erasmus MC, Rotterdam, The Netherlands
出版信息
Genome Announc. 2018 Mar 29;6(13):e00184-18. doi: 10.1128/genomeA.00184-18.
Abstract
Genetic characterization of wild-type measles virus (MV) strains is a critical component of measles surveillance and molecular epidemiology. We have obtained complete genome sequences of six MV strains belonging to different genotypes, using random-primed next generation sequencing.
摘要
野生型麻疹病毒（MV）毒株的基因特征分析是麻疹监测和分子流行病学的关键组成部分。我们利用随机引物新一代测序技术获得了属于不同基因型的6株MV毒株的完整基因组序列。
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Virus Evol. 2016 Oct 3;2(2):vew027. doi: 10.1093/ve/vew027. eCollection 2016 Jul.
2
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Euro Surveill. 2017 Jan 19;22(3). doi: 10.2807/1560-7917.ES.2017.22.3.30443.
3
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4
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