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探寻微小RNA转录组

Fishing Into the MicroRNA Transcriptome.

作者信息

Herkenhoff Marcos E, Oliveira Arthur C, Nachtigall Pedro G, Costa Juliana M, Campos Vinicius F, Hilsdorf Alexandre W S, Pinhal Danillo

机构信息

Laboratory of Genomics and Molecular Evolution, Department of Genetics, Institute of Biosciences of Botucatu, Sao Paulo State University, Botucatu, Brazil.

Laboratory of Structural Genomics (GenEstrut), Graduate Program of Biotechnology, Technology Developmental Center, Federal University of Pelotas, Pelotas, Brazil.

出版信息

Front Genet. 2018 Mar 19;9:88. doi: 10.3389/fgene.2018.00088. eCollection 2018.

Abstract

In the last decade, several studies have been focused on revealing the microRNA (miRNA) repertoire and determining their functions in farm animals such as poultry, pigs, cattle, and fish. These small non-protein coding RNA molecules (18-25 nucleotides) are capable of controlling gene expression by binding to messenger RNA (mRNA) targets, thus interfering in the final protein output. MiRNAs have been recognized as the main regulators of biological features of economic interest, including body growth, muscle development, fat deposition, and immunology, among other highly valuable traits, in aquatic livestock. Currently, the miRNA repertoire of some farmed fish species has been identified and characterized, bringing insights about miRNA functions, and novel perspectives for improving health and productivity. In this review, we summarize the current advances in miRNA research by examining available data on Neotropical and other key species exploited by fisheries and in aquaculture worldwide and discuss how future studies on Neotropical fish could benefit from this knowledge. We also make a horizontal comparison of major results and discuss forefront strategies for miRNA manipulation in aquaculture focusing on forward-looking ideas for forthcoming research.

摘要

在过去十年中,多项研究聚焦于揭示微小RNA(miRNA)库,并确定其在家禽、猪、牛和鱼类等养殖动物中的功能。这些小的非蛋白质编码RNA分子(18 - 25个核苷酸)能够通过与信使RNA(mRNA)靶标结合来控制基因表达,从而干扰最终的蛋白质产出。在水生家畜中,miRNA已被确认为经济性状生物学特征的主要调节因子,包括身体生长、肌肉发育、脂肪沉积和免疫学等其他高价值性状。目前,一些养殖鱼类的miRNA库已被鉴定和表征,这为了解miRNA功能以及改善健康和生产力带来了新的视角。在本综述中,我们通过研究全球渔业和水产养殖中开发利用的新热带鱼类及其他关键物种的现有数据,总结了miRNA研究的当前进展,并讨论了关于新热带鱼类的未来研究如何能从这些知识中受益。我们还对主要结果进行了横向比较,并讨论了水产养殖中miRNA调控的前沿策略,重点关注未来研究的前瞻性思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc31/5868305/8ee30e85870e/fgene-09-00088-g0001.jpg

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