• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

铁稳态调控适应性基因组控制中的兼性异染色质组装。

Iron homeostasis regulates facultative heterochromatin assembly in adaptive genome control.

机构信息

Laboratory of Biochemistry and Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.

Human Genetics Unit, Indian Statistical Institute, Kolkata, India.

出版信息

Nat Struct Mol Biol. 2018 May;25(5):372-383. doi: 10.1038/s41594-018-0056-2. Epub 2018 Apr 23.

DOI:10.1038/s41594-018-0056-2
PMID:29686279
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5936480/
Abstract

Iron metabolism is critical for sustaining life and maintaining human health. Here, we find that iron homeostasis is linked to facultative heterochromatin assembly and regulation of gene expression during adaptive genome control. We show that the fission yeast Clr4/Suv39h histone methyltransferase is part of a rheostat-like mechanism in which transcriptional upregulation of mRNAs in response to environmental change provides feedback to prevent their uncontrolled expression through heterochromatin assembly. Interestingly, proper iron homeostasis is required, as iron depletion or downregulation of iron transporters causes defects in heterochromatin assembly and unrestrained upregulation of gene expression. Remarkably, an unbiased genetic screen revealed that restoration of iron homeostasis is sufficient to re-establish facultative heterochromatin and proper gene control genome-wide. These results establish a role for iron homeostasis in facultative heterochromatin assembly and reveal a dynamic mechanism for reprogramming the genome in response to environmental changes.

摘要

铁代谢对于维持生命和人类健康至关重要。在这里,我们发现铁稳态与适应性基因组控制过程中的兼性异染色质组装和基因表达调控有关。我们表明,裂殖酵母 Clr4/Suv39h 组蛋白甲基转移酶是一种变阻器样机制的一部分,该机制通过转录上调 mRNA 来响应环境变化提供反馈,以防止通过异染色质组装失控表达。有趣的是,适当的铁稳态是必需的,因为铁耗竭或铁转运蛋白的下调会导致异染色质组装缺陷和基因表达不受控制的上调。值得注意的是,一项无偏遗传筛选揭示了铁稳态的恢复足以重新建立兼性异染色质和整个基因组的适当基因控制。这些结果确立了铁稳态在兼性异染色质组装中的作用,并揭示了一种针对环境变化重新编程基因组的动态机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/764e22c0d408/nihms950454f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/49ad6aaa163a/nihms950454f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/a1feca8dd62c/nihms950454f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/b26823c812df/nihms950454f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/57d86cf4a6b2/nihms950454f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/e76773e38e52/nihms950454f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/073de3dfe6e3/nihms950454f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/13de318acc5a/nihms950454f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/764e22c0d408/nihms950454f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/49ad6aaa163a/nihms950454f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/a1feca8dd62c/nihms950454f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/b26823c812df/nihms950454f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/57d86cf4a6b2/nihms950454f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/e76773e38e52/nihms950454f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/073de3dfe6e3/nihms950454f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/13de318acc5a/nihms950454f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084d/5936480/764e22c0d408/nihms950454f8.jpg

相似文献

1
Iron homeostasis regulates facultative heterochromatin assembly in adaptive genome control.铁稳态调控适应性基因组控制中的兼性异染色质组装。
Nat Struct Mol Biol. 2018 May;25(5):372-383. doi: 10.1038/s41594-018-0056-2. Epub 2018 Apr 23.
2
RNA elimination machinery targeting meiotic mRNAs promotes facultative heterochromatin formation.靶向减数分裂 mRNAs 的 RNA 消除机制促进了兼性异染色质的形成。
Science. 2012 Jan 6;335(6064):96-100. doi: 10.1126/science.1211651. Epub 2011 Dec 1.
3
Taz1-Shelterin Promotes Facultative Heterochromatin Assembly at Chromosome-Internal Sites Containing Late Replication Origins.Taz1-保护素促进在含有晚期复制起点的染色体内部位点组装兼性异染色质。
Mol Cell. 2016 Jun 16;62(6):862-874. doi: 10.1016/j.molcel.2016.04.034. Epub 2016 Jun 2.
4
Conserved factor Dhp1/Rat1/Xrn2 triggers premature transcription termination and nucleates heterochromatin to promote gene silencing.保守因子Dhp1/Rat1/Xrn2触发过早转录终止并使异染色质成核以促进基因沉默。
Proc Natl Acad Sci U S A. 2015 Dec 22;112(51):15548-55. doi: 10.1073/pnas.1522127112. Epub 2015 Dec 2.
5
CPF Recruitment to Non-canonical Transcription Termination Sites Triggers Heterochromatin Assembly and Gene Silencing.CPF 招募到非规范转录终止位点会触发异染色质组装和基因沉默。
Cell Rep. 2019 Jul 2;28(1):267-281.e5. doi: 10.1016/j.celrep.2019.05.107.
6
Transcription-induced chromatin association of RNA surveillance factors mediates facultative heterochromatin formation in fission yeast.转录诱导的 RNA 监测因子与染色质的关联介导了有丝分裂酵母中兼性异染色质的形成。
Genes Cells. 2013 Apr;18(4):327-39. doi: 10.1111/gtc.12038. Epub 2013 Feb 6.
7
Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs.组蛋白H2A.Z与RNA干扰及异染色质因子协同作用以抑制反义RNA。
Nature. 2009 Sep 17;461(7262):419-22. doi: 10.1038/nature08321. Epub 2009 Aug 19.
8
Histone deacetylation promotes transcriptional silencing at facultative heterochromatin.组蛋白去乙酰化促进了兼性异染色质的转录沉默。
Nucleic Acids Res. 2018 Jun 20;46(11):5426-5440. doi: 10.1093/nar/gky232.
9
Sir2 is required for Clr4 to initiate centromeric heterochromatin assembly in fission yeast.Sir2 对于裂殖酵母中 Clr4 引发着丝粒异染色质组装是必需的。
EMBO J. 2013 Aug 28;32(17):2321-35. doi: 10.1038/emboj.2013.143. Epub 2013 Jun 14.
10
RNA quality control factors nucleate Clr4/SUV39H and trigger constitutive heterochromatin assembly.RNA 质量控制因子促使 Clr4/SUV39H 形成并引发组成型异染色质组装。
Cell. 2024 Jun 20;187(13):3262-3283.e23. doi: 10.1016/j.cell.2024.04.042. Epub 2024 May 29.

引用本文的文献

1
Fission yeast Caprin protein is required for efficient heterochromatin establishment.裂殖酵母的Caprin蛋白是高效建立异染色质所必需的。
PLoS Genet. 2025 Mar 10;21(3):e1011620. doi: 10.1371/journal.pgen.1011620. eCollection 2025 Mar.
2
Nucleosome remodeler exclusion by histone deacetylation enforces heterochromatic silencing and epigenetic inheritance.组蛋白去乙酰化排斥核小体重塑因子,从而加强异染色质沉默和表观遗传遗传。
Mol Cell. 2024 Sep 5;84(17):3175-3191.e8. doi: 10.1016/j.molcel.2024.07.006. Epub 2024 Aug 2.
3
Mapping the dynamics of epigenetic adaptation in S. pombe during heterochromatin misregulation.

本文引用的文献

1
Selective termination of lncRNA transcription promotes heterochromatin silencing and cell differentiation.lncRNA转录的选择性终止促进异染色质沉默和细胞分化。
EMBO J. 2017 Sep 1;36(17):2626-2641. doi: 10.15252/embj.201796571. Epub 2017 Aug 1.
2
mA in mRNA: An Ancient Mechanism for Fine-Tuning Gene Expression.mRNA 中的 mA:精细调控基因表达的古老机制。
Trends Genet. 2017 Jun;33(6):380-390. doi: 10.1016/j.tig.2017.04.003. Epub 2017 May 9.
3
Accumulation of RNA on chromatin disrupts heterochromatic silencing.RNA在染色质上的积累会破坏异染色质沉默。
在异染色质调控异常时,绘制 S. pombe 中表观遗传适应的动态变化。
Dev Cell. 2024 Aug 19;59(16):2222-2238.e4. doi: 10.1016/j.devcel.2024.07.006. Epub 2024 Aug 1.
4
Mathematical model for the role of multiple pericentromeric repeats on heterochromatin assembly.多着丝粒重复序列在异染色质组装中作用的数学模型
PLoS Comput Biol. 2024 Apr 10;20(4):e1012027. doi: 10.1371/journal.pcbi.1012027. eCollection 2024 Apr.
5
The Cross-Regulation Between Set1, Clr4, and Lsd1/2 in Schizosaccharomyces pombe.《裂殖酵母 Set1、Clr4 和 LSD1/2 之间的相互调控》
PLoS Genet. 2024 Jan 5;20(1):e1011107. doi: 10.1371/journal.pgen.1011107. eCollection 2024 Jan.
6
The molecular basis of heterochromatin assembly and epigenetic inheritance.异染色质组装和表观遗传遗传的分子基础。
Mol Cell. 2023 Jun 1;83(11):1767-1785. doi: 10.1016/j.molcel.2023.04.020. Epub 2023 May 18.
7
The inner nuclear membrane protein Lem2 coordinates RNA degradation at the nuclear periphery.核内层膜蛋白 Lem2 协调核周 RNA 降解。
Nat Struct Mol Biol. 2022 Sep;29(9):910-921. doi: 10.1038/s41594-022-00831-6. Epub 2022 Sep 19.
8
Proteasome-dependent truncation of the negative heterochromatin regulator Epe1 mediates antifungal resistance.蛋白酶体依赖性截短负染色质调节剂 Epe1 介导抗真菌耐药性。
Nat Struct Mol Biol. 2022 Aug;29(8):745-758. doi: 10.1038/s41594-022-00801-y. Epub 2022 Jul 25.
9
The cAMP signaling pathway regulates Epe1 protein levels and heterochromatin assembly.cAMP 信号通路调节 Epe1 蛋白水平和异染色质组装。
PLoS Genet. 2022 Feb 16;18(2):e1010049. doi: 10.1371/journal.pgen.1010049. eCollection 2022 Feb.
10
Genome-wide chromosomal association of Upf1 is linked to Pol II transcription in Schizosaccharomyces pombe.在裂殖酵母中,Upf1 的全基因组染色体关联与 Pol II 转录有关。
Nucleic Acids Res. 2022 Jan 11;50(1):350-367. doi: 10.1093/nar/gkab1249.
Genome Res. 2017 Jul;27(7):1174-1183. doi: 10.1101/gr.216986.116. Epub 2017 Apr 12.
4
Untimely expression of gametogenic genes in vegetative cells causes uniparental disomy.配子发生基因在营养细胞中的过早表达会导致单亲二体性。
Nature. 2017 Mar 2;543(7643):126-130. doi: 10.1038/nature21372. Epub 2017 Feb 15.
5
Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs.静止状态下的存活需要AGO相关小RNA对Clr4/SUV39H进行常染色质部署。
Mol Cell. 2016 Dec 15;64(6):1088-1101. doi: 10.1016/j.molcel.2016.11.020.
6
Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts.鉴定核小体降解途径对加工转录本的作用。
Mol Cell. 2016 Nov 3;64(3):520-533. doi: 10.1016/j.molcel.2016.09.025. Epub 2016 Oct 27.
7
Complex heatmaps reveal patterns and correlations in multidimensional genomic data.复杂热图揭示多维基因组数据中的模式和相关性。
Bioinformatics. 2016 Sep 15;32(18):2847-9. doi: 10.1093/bioinformatics/btw313. Epub 2016 May 20.
8
New Insights into the Regulation of Heterochromatin.异染色质调控的新见解
Trends Genet. 2016 May;32(5):284-294. doi: 10.1016/j.tig.2016.02.005. Epub 2016 Mar 20.
9
Enhancer of Rudimentary Cooperates with Conserved RNA-Processing Factors to Promote Meiotic mRNA Decay and Facultative Heterochromatin Assembly.原始因子增强子与保守的RNA加工因子协同作用,促进减数分裂mRNA衰变和兼性异染色质组装。
Mol Cell. 2016 Mar 3;61(5):747-759. doi: 10.1016/j.molcel.2016.01.029.
10
A Novel Epigenetic Silencing Pathway Involving the Highly Conserved 5'-3' Exoribonuclease Dhp1/Rat1/Xrn2 in Schizosaccharomyces pombe.一种涉及粟酒裂殖酵母中高度保守的5'-3'外切核糖核酸酶Dhp1/Rat1/Xrn2的新型表观遗传沉默途径。
PLoS Genet. 2016 Feb 18;12(2):e1005873. doi: 10.1371/journal.pgen.1005873. eCollection 2016 Feb.