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荠蓝,一种位于模式系统和商业作物之间的油料作物。

Camelina sativa, an oilseed at the nexus between model system and commercial crop.

机构信息

Metabolix Oilseeds, Inc., 110 Gymnasium Place, Saskatoon, SK, S7N 0W9, Canada.

Yield10 Bioscience, Inc., 19 Presidential Way, Woburn, MA, 01801, USA.

出版信息

Plant Cell Rep. 2018 Oct;37(10):1367-1381. doi: 10.1007/s00299-018-2308-3. Epub 2018 Jun 7.

Abstract

The rapid assessment of metabolic engineering strategies in plants is aided by crops that provide simple, high throughput transformation systems, a sequenced genome, and the ability to evaluate the resulting plants in field trials. Camelina sativa provides all of these attributes in a robust oilseed platform. The ability to perform field evaluation of Camelina is a useful, and in some studies essential benefit that allows researchers to evaluate how traits perform outside the strictly controlled conditions of a greenhouse. In the field the plants are subjected to higher light intensities, seasonal diurnal variations in temperature and light, competition for nutrients, and watering regimes dictated by natural weather patterns, all which may affect trait performance. There are difficulties associated with the use of Camelina. The current genetic resources available for Camelina pale in comparison to those developed for the model plant Arabidopsis thaliana; however, the sequence similarity of the Arabidopsis and Camelina genomes often allows the use of Arabidopsis as a reference when additional information is needed. Camelina's genome, an allohexaploid, is more complex than other model crops, but the diploid inheritance of its three subgenomes is straightforward. The need to navigate three copies of each gene in genome editing or mutagenesis experiments adds some complexity but also provides advantages for gene dosage experiments. The ability to quickly engineer Camelina with novel traits, advance generations, and bulk up homozygous lines for small-scale field tests in less than a year, in our opinion, far outweighs the complexities associated with the crop.

摘要

通过使用提供简单、高通量转化系统、已测序基因组,并能够在田间试验中评估所得植物的作物,可以帮助快速评估植物中的代谢工程策略。荠蓝提供了所有这些特性,是一种强大的油料作物平台。能够在田间评估荠蓝是一个有用的,在某些研究中是必不可少的好处,它使研究人员能够评估性状在温室严格控制条件之外的表现。在田间,植物会受到更高的光强、季节性昼夜温度和光照变化、养分竞争以及由自然天气模式决定的浇水制度的影响,所有这些都可能影响性状表现。荠蓝的使用存在一些困难。与用于模式植物拟南芥的遗传资源相比,目前可用于荠蓝的遗传资源相形见绌;然而,拟南芥和荠蓝基因组的序列相似性通常允许在需要额外信息时使用拟南芥作为参考。荠蓝的基因组是异源六倍体,比其他模式作物更复杂,但它的三个亚基因组的二倍体遗传是简单的。在基因组编辑或诱变实验中需要导航每个基因的三个副本,这增加了一些复杂性,但也为基因剂量实验提供了优势。在不到一年的时间内,我们能够快速用新性状工程荠蓝、推进世代,并为小规模田间试验增加纯合系的能力,在我们看来,远远超过了与该作物相关的复杂性。

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