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建立一个用于模拟主动脉缩窄对左心室负荷影响的计算框架。

Towards a Computational Framework for Modeling the Impact of Aortic Coarctations Upon Left Ventricular Load.

作者信息

Karabelas Elias, Gsell Matthias A F, Augustin Christoph M, Marx Laura, Neic Aurel, Prassl Anton J, Goubergrits Leonid, Kuehne Titus, Plank Gernot

机构信息

Computational Cardiology Laboratory, Institute of Biophysics, Medical University of Graz, Graz, Austria.

Shadden Research Group, Department of Mechanical Engineering, University of California, Berkeley, Berkeley, CA, United States.

出版信息

Front Physiol. 2018 May 28;9:538. doi: 10.3389/fphys.2018.00538. eCollection 2018.

Abstract

Computational fluid dynamics (CFD) models of blood flow in the left ventricle (LV) and aorta are important tools for analyzing the mechanistic links between myocardial deformation and flow patterns. Typically, the use of image-based kinematic CFD models prevails in applications such as predicting the acute response to interventions which alter LV afterload conditions. However, such models are limited in their ability to analyze any impacts upon LV load or key biomarkers known to be implicated in driving remodeling processes as LV function is not accounted for in a mechanistic sense. This study addresses these limitations by reporting on progress made toward a novel electro-mechano-fluidic (EMF) model that represents the entire physics of LV electromechanics (EM) based on first principles. A biophysically detailed finite element (FE) model of LV EM was coupled with a FE-based CFD solver for moving domains using an arbitrary Eulerian-Lagrangian (ALE) formulation. Two clinical cases of patients suffering from aortic coarctations (CoA) were built and parameterized based on clinical data under pre-treatment conditions. For one patient case simulations under post-treatment conditions after geometric repair of CoA by a virtual stenting procedure were compared against pre-treatment results. Numerical stability of the approach was demonstrated by analyzing mesh quality and solver performance under the significantly large deformations of the LV blood pool. Further, computational tractability and compatibility with clinical time scales were investigated by performing strong scaling benchmarks up to 1536 compute cores. The overall cost of the entire workflow for building, fitting and executing EMF simulations was comparable to those reported for image-based kinematic models, suggesting that EMF models show potential of evolving into a viable clinical research tool.

摘要

左心室(LV)和主动脉中血流的计算流体动力学(CFD)模型是分析心肌变形与血流模式之间机制联系的重要工具。通常,基于图像的运动学CFD模型在诸如预测改变LV后负荷条件的干预措施的急性反应等应用中占主导地位。然而,此类模型在分析对LV负荷或已知与驱动重塑过程有关的关键生物标志物的任何影响方面能力有限,因为在机制层面上未考虑LV功能。本研究通过报告在一种新型机电流体(EMF)模型方面取得的进展来解决这些局限性,该模型基于第一原理表示LV机电学(EM)的整个物理过程。LV EM的生物物理详细有限元(FE)模型与基于FE的CFD求解器耦合,用于使用任意欧拉-拉格朗日(ALE)公式的移动域。基于两名患有主动脉缩窄(CoA)患者的临床数据,在治疗前条件下构建并参数化了两个临床病例。对于其中一名患者,通过虚拟支架置入术对CoA进行几何修复后,将治疗后条件下的模拟结果与治疗前结果进行了比较。通过分析LV血池在显著大变形下的网格质量和求解器性能,证明了该方法的数值稳定性。此外,通过执行高达1536个计算核心的强缩放基准测试,研究了计算可处理性和与临床时间尺度兼容性。构建、拟合和执行EMF模拟的整个工作流程的总成本与基于图像的运动学模型报告的成本相当,这表明EMF模型显示出发展成为可行临床研究工具的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce1c/5985756/1ce81661835a/fphys-09-00538-g0001.jpg

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