Liu Naiyi, Li Na, Yang Pengyu, Sun Chunqin, Fang Jie, Wang Shuyan
School of Life Sciences, Anhui University, Hefei, China.
Genes Genomics. 2018 Jan;40(1):109-122. doi: 10.1007/s13258-017-0614-8. Epub 2017 Oct 17.
The monotypic genus Damora (Nymphalidae, Heliconiinae) contains a single species, Damora sagana, which is widely distributed across southern China. Herein, its complete mitogenome was sequenced to further understand lepidopteran mitogenome characteristics, reconstruct the nymphalid family phylogeny, and infer the subdivision of Heliconiinae species. The circular mitogenome was 15,151 bp long, abundant in A and T, and comprised of 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes, and one control region with a gene arrangement typical of lepidopteran mitogenomes. ATN codons initiated all PCGs, except cytochrome c oxidase subunit 1 (COX1), which was initiated by a CGA sequence as has been observed in other lepidopterans. Three PCGs (COX1, COX2 and ND4) employed a single T termination signal, whereas others had the typical complete termination codon (TAA). All tRNA genes were folded into the typical cloverleaf structure except for tRNA-Ser (AGN). The A+T-rich region included the conserved motif 'ATAGA' followed by a 17 bp poly-T stretch, which was also observed in tribe Argynnini mitogenomes. A phylogenetic tree was constructed via multiple methods using the 13 PCGs data of D. sagana and other available mitogenomes of nymphalid species. All three phylogenetic trees yielded the same topology. These results were consistent with those from previous studies of most major nymphalid groups, except those regarding tribe subdivision in certain subfamilies such as Argynnini + (Acraeini + Heliconiini) for Heliconiine. Furthermore, our analyses identified that the genus Cethosia was grouped with the genus Acraea composing the tribe Acraeini with strong support.
单型属达摩绢蝶属(蛱蝶科,闪蝶亚科)包含单一物种达摩绢蝶(Damora sagana),广泛分布于中国南部。在此,对其完整线粒体基因组进行测序,以进一步了解鳞翅目线粒体基因组特征,重建蛱蝶科系统发育关系,并推断闪蝶亚科物种的细分情况。该环状线粒体基因组长度为15,151 bp,富含A和T,由13个蛋白质编码基因(PCGs)、22个转运RNA(tRNA)基因、2个核糖体RNA(rRNA)基因和一个控制区组成,其基因排列具有鳞翅目线粒体基因组的典型特征。除细胞色素c氧化酶亚基1(COX1)外,所有PCGs均由ATN密码子起始,COX1如在其他鳞翅目中观察到的那样,由CGA序列起始。三个PCGs(COX1、COX2和ND4)使用单一的T终止信号,而其他PCGs具有典型的完整终止密码子(TAA)。除了tRNA-Ser(AGN)外,所有tRNA基因都折叠成典型的三叶草结构。富含A+T的区域包含保守基序“ATAGA”,其后是17 bp的多聚T序列,这在银斑绢蝶族线粒体基因组中也有观察到。利用达摩绢蝶的13个PCGs数据和其他可用的蛱蝶科物种线粒体基因组,通过多种方法构建了系统发育树。所有三个系统发育树都产生了相同的拓扑结构。这些结果与之前对大多数主要蛱蝶类群的研究结果一致,除了某些亚科中关于族细分的研究结果,如闪蝶亚科的银斑绢蝶族+(珍蝶族+闪蝶族)。此外,我们的分析确定,彩裙蝶属与珍蝶属聚在一起,构成珍蝶族,且支持度很高。