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基于Illumina MiSeq测序揭示的参与硝化作用的制革废水微生物群落

Microbial Community of Tannery Wastewater Involved in Nitrification Revealed by Illumina MiSeq Sequencing.

作者信息

Ma Xiaojian, Wu Chongde, Huang Jun, Zhou Rongqing, Shi Bi

机构信息

National Engineering Laboratory of Clean Technology for Leather Manufacture, Sichuan University, Chengdu 610065, China.

College of Light Industry, Textile and Food Engineering, Sichuan University, Chengdu 610065, China.

出版信息

J Microbiol Biotechnol. 2018 Jul 28;28(7):1168-1177. doi: 10.4014/jmb.1712.12054.

Abstract

The aim of this study was to investigate the microbial community of three tannery wastewater treatment plants (WWTPs) involved in nitrification by Illumina MiSeq sequencing. The results showed that highly diverse communities were present in tannery wastewater. A total of six phyla, including Proteobacteria (37-41%), Bacteroidetes (6.04-16.80), Planctomycetes (3.65-16.55), Chloroflexi (2.51-11.48), Actinobacteria (1.91-9.21), and Acidobacteria (3.04-6.20), were identified as the main phyla, and Proteobacteria dominated in all the samples. Within Proteobacteria, Beta-proteobacteria was the most abundant class, with the sequence percentages ranging from 9.66% to 17.44%. Analysis of the community at the genus level suggested that , Gp4, , , and were the core genera shared by at least two tannery WWTPs. A detailed analysis of the abundance of ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB) indicated that , , and were the main AOB and NOB in tannery wastewater, respectively, which exhibited relatively high abundance in all samples. In addition, real-time quantitative PCR was conducted to validate the results by quantifying the abundance of the AOB and total bacteria, and similar results were obtained. Overall, the results presented in this study may provide new insights into our understanding of key microorganisms and the entire community of tannery wastewater and contribute to improving the nitrogen removal efficiency.

摘要

本研究旨在通过Illumina MiSeq测序调查三家参与硝化作用的制革废水处理厂(WWTPs)的微生物群落。结果表明,制革废水中存在高度多样化的群落。共鉴定出六个门,包括变形菌门(37-41%)、拟杆菌门(6.04-16.80)、浮霉菌门(3.65-16.55)、绿弯菌门(2.51-11.48)、放线菌门(1.91-9.2)和酸杆菌门(3.04-6.20),这些为主要门类,且变形菌门在所有样本中占主导地位。在变形菌门中,β-变形菌纲最为丰富,序列百分比范围为9.66%至17.44%。属水平的群落分析表明,Gp4、、和是至少两个制革废水处理厂共有的核心属。对氨氧化细菌(AOB)和亚硝酸盐氧化细菌(NOB)丰度的详细分析表明,、和分别是制革废水中主要的AOB和NOB,它们在所有样本中均表现出相对较高的丰度。此外,进行了实时定量PCR,通过量化AOB和总细菌的丰度来验证结果,获得了相似的结果。总体而言,本研究结果可能为我们理解制革废水的关键微生物和整个群落提供新的见解,并有助于提高脱氮效率。

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