Child Health Research Centre, The University of Queensland, Brisbane, Australia.
Centre for Children's Health Research, Children's Health Queensland, Brisbane, Australia.
Malar J. 2018 Jul 5;17(1):249. doi: 10.1186/s12936-018-2382-6.
Evaluating the efficacy of transmission-blocking interventions relies on mosquito-feeding assays, with transmission typically assessed by microscopic identification of oocysts in mosquito midguts; however, microscopy has limited throughput, sensitivity and specificity. Where low prevalence and intensity mosquito infections occur, as observed during controlled human malaria infection studies or natural transmission, a reliable method for detection and quantification of low-level midgut infection is required. Here, a semi-automated, Taqman quantitative PCR (qPCR) assay sufficiently sensitive to detect a single-oocyst midgut infection is described.
Extraction of genomic DNA from Anopheles stephensi midguts using a semi-automated extraction process was shown to have equivalent extraction efficiency to manual DNA extraction. An 18S Plasmodium falciparum qPCR assay was adapted for quantitative detection of P. falciparum midgut oocyst infection using synthetic DNA standards. The assay was validated for sensitivity and specificity, and the limit of detection was 0.7 genomes/µL (95% CI 0.4-1.6 genomes/µL). All microscopy-confirmed oocyst infected midgut samples were detected by qPCR, including all single-oocyst positive midguts. The genome number per oocyst was assessed 8-9 days after feeding assay using both qPCR and droplet digital PCR and was 3722 (IQR: 2951-5453) and 3490 (IQR: 2720-4182), respectively.
This semi-automated qPCR method enables accurate detection of low-level P. falciparum oocyst infections in mosquito midguts, and may improve the sensitivity, specificity and throughput of assays used to evaluate candidate transmission-blocking interventions.
评估阻断传播干预措施的效果依赖于蚊虫喂食检测,通过在蚊虫中肠内镜下识别卵囊来评估传播情况,但这种方法检测效率低、灵敏度和特异性差。在人类疟疾感染控制研究或自然传播中,往往会观察到低感染率和强度的蚊虫感染,因此需要一种可靠的方法来检测和定量分析低水平的中肠感染。本文描述了一种半自动化 Taqman 定量 PCR(qPCR)检测方法,该方法具有足够的灵敏度,可以检测到单个卵囊的中肠感染。
从半自动化提取过程中提取的按蚊中肠基因组 DNA 显示出与手动 DNA 提取相当的提取效率。使用合成 DNA 标准品,对 18S 疟原虫 falciparum qPCR 检测方法进行了适应性修改,以定量检测疟原虫中肠卵囊感染。该检测方法经过了灵敏度和特异性验证,检测限为 0.7 个基因组/µL(95%置信区间 0.4-1.6 个基因组/µL)。qPCR 检测到所有经镜检确认的卵囊感染中肠样本,包括所有单卵囊阳性的中肠。在喂食后 8-9 天,使用 qPCR 和数字液滴 PCR 检测到每个卵囊的基因组数分别为 3722(IQR:2951-5453)和 3490(IQR:2720-4182)。
这种半自动化的 qPCR 方法可以准确检测到蚊虫中肠内低水平的疟原虫 falciparum 卵囊感染,可能提高评估候选传播阻断干预措施的检测的灵敏度、特异性和通量。