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羟基化碳纳米管通过计算与实验联合研究揭示对人胰岛淀粉样多肽聚集的抑制作用。

The Inhibitory Effect of Hydroxylated Carbon Nanotubes on the Aggregation of Human Islet Amyloid Polypeptide Revealed by a Combined Computational and Experimental Study.

机构信息

State Key Laboratory of Surface Physics, Key Laboratory for Computational Physical Science (Ministry of Education), Collaborative Innovation Center of Advanced Microstructures, and Department of Physics , Fudan University , Shanghai 200433 , People's Republic of China.

College of Physical Science and Technology , Guangxi Normal University , 15 Yucai Road , Guilin 541004 , People's Republic of China.

出版信息

ACS Chem Neurosci. 2018 Nov 21;9(11):2741-2752. doi: 10.1021/acschemneuro.8b00166. Epub 2018 Jul 23.

Abstract

Fibrillar deposits formed by the aggregation of the human islet amyloid polypeptide (hIAPP) are the major pathological hallmark of type 2 diabetes mellitus (T2DM). Inhibiting the aggregation of hIAPP is considered the primary therapeutic strategy for the treatment of T2DM. Hydroxylated carbon nanoparticles have received great attention in impeding amyloid protein fibrillation owing to their reduced cytotoxicity compared to the pristine ones. In this study, we investigated the influence of hydroxylated single-walled carbon nanotubes (SWCNT-OHs) on the first step of hIAPP aggregation: dimerization by performing explicit solvent replica exchange molecular dynamics (REMD) simulations. Extensive REMD simulations demonstrate that SWCNT-OHs can dramatically inhibit interpeptide β-sheet formation and completely suppress the previously reported β-hairpin amyloidogenic precursor of hIAPP. On the basis of our simulation results, we proposed that SWCNT-OH can hinder hIAPP fibrillation. This was further confirmed by our systematic turbidity measurements, thioflavin T fluorescence, circular dichroism (CD), transmission electron microscope (TEM), and atomic force microscopy (AFM) experiments. Detailed analyses of hIAPP-SWCNT-OH interactions reveal that hydrogen bonding, van der Waals, and π-stacking interactions between hIAPP and SWCNT-OH significantly weaken the inter- and intrapeptide interactions that are crucial for β-sheet formation. Our collective computational and experimental data reveal not only the inhibitory effect but also the inhibitory mechanism of SWCNT-OH against hIAPP aggregation, thus providing new clues for the development of future drug candidates against T2DM.

摘要

纤维状沉积物由人胰岛淀粉样多肽(hIAPP)的聚集形成,是 2 型糖尿病(T2DM)的主要病理特征。抑制 hIAPP 的聚集被认为是治疗 T2DM 的主要治疗策略。与原始碳纳米管相比,羟基化碳纳米粒子由于其细胞毒性降低而在阻止淀粉样蛋白聚集方面受到了极大关注。在这项研究中,我们通过进行显式溶剂取代交换分子动力学(REMD)模拟,研究了羟基化单壁碳纳米管(SWCNT-OH)对 hIAPP 聚集第一步的影响:二聚化。广泛的 REMD 模拟表明,SWCNT-OH 可以显著抑制肽间β-折叠形成,并完全抑制先前报道的 hIAPP 的β-发夹原纤维形成前体。基于我们的模拟结果,我们提出 SWCNT-OH 可以阻止 hIAPP 纤维化。这通过我们系统的浊度测量、硫黄素 T 荧光、圆二色性(CD)、透射电子显微镜(TEM)和原子力显微镜(AFM)实验进一步得到证实。对 hIAPP-SWCNT-OH 相互作用的详细分析表明,hIAPP 和 SWCNT-OH 之间的氢键、范德华力和π-堆积相互作用显著削弱了对β-折叠形成至关重要的肽间和肽内相互作用。我们的集体计算和实验数据不仅揭示了 SWCNT-OH 对 hIAPP 聚集的抑制作用,而且揭示了其抑制机制,从而为开发针对 T2DM 的未来药物候选物提供了新的线索。

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