Suppr超能文献

基于序列的命名法短期内对真菌无用的十个原因。

Ten reasons why a sequence-based nomenclature is not useful for fungi anytime soon.

作者信息

Thines Marco, Crous Pedro W, Aime M Catherine, Aoki Takayuki, Cai Lei, Hyde Kevin D, Miller Andrew N, Zhang Ning, Stadler Marc

机构信息

Goethe University, Department of Biological Sciences, Institute of Ecology, Evolution and Diversity, Max-von-Laue-Str. 13, D-60483 Frankfurt am Main, Germany.

Senckenberg Biodiversity and Climate Research Centre, Senckenberganlage 25, D-60325 Frankfurt am Main, Germany.

出版信息

IMA Fungus. 2018 Jun;9(1):177-183. doi: 10.5598/imafungus.2018.09.01.11. Epub 2018 May 28.

Abstract

The large number of species still to be discovered in fungi, together with an exponentially growing number of environmental sequences that cannot be linked to known taxa, has fuelled the idea that it might be necessary to formally name fungi on the basis of sequence data only. Here we object to this idea due to several shortcomings of the approach, ranging from concerns regarding reproducibility and the violation of general scientific principles to ethical issues. We come to the conclusion that sequence-based nomenclature is potentially harmful for mycology as a discipline. Additionally, a classification based on sequences as types is not within reach anytime soon, because there is a lack of consensus regarding common standards due to the fast pace at which sequencing technologies develop.

摘要

真菌中仍有待发现的大量物种,以及数量呈指数级增长且无法与已知分类群相关联的环境序列,促使人们认为可能有必要仅基于序列数据对真菌进行正式命名。在此,我们反对这一观点,因为该方法存在若干缺陷,从对可重复性的担忧、违反一般科学原则到伦理问题。我们得出的结论是,基于序列的命名法对作为一门学科的真菌学可能有害。此外,基于序列作为类型的分类在短期内无法实现,因为由于测序技术发展迅速,在通用标准方面缺乏共识。

相似文献

5
New light on names and naming of dark taxa.关于隐秘分类群的名称及命名的新见解。
MycoKeys. 2018 Feb 23(30):31-39. doi: 10.3897/mycokeys.30.24376. eCollection 2018.
7
One fungus, one name promotes progressive plant pathology.一菌一名,推动植物病理学发展。
Mol Plant Pathol. 2012 Aug;13(6):604-13. doi: 10.1111/j.1364-3703.2011.00768.x. Epub 2011 Dec 6.
9

引用本文的文献

本文引用的文献

1
Introducing ribosomal tandem repeat barcoding for fungi.引入核糖体串联重复条形码技术用于真菌研究。
Mol Ecol Resour. 2019 Jan;19(1):118-127. doi: 10.1111/1755-0998.12944. Epub 2018 Oct 24.
2
species causing leaf-stripe smut revisited.引起叶条黑粉病的物种再探讨。
IMA Fungus. 2018 Jun;9(1):49-73. doi: 10.5598/imafungus.2018.09.01.05. Epub 2018 Mar 20.
5
Phylogenetics and Phylogenomics of Rust Fungi.锈菌的系统发育和系统基因组学。
Adv Genet. 2017;100:267-307. doi: 10.1016/bs.adgen.2017.09.011. Epub 2017 Oct 26.
10

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验