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利用 Cas9 变体扩展水稻中的碱基编辑范围。

Expanding the base editing scope in rice by using Cas9 variants.

机构信息

Shanghai Center for Plant Stress Biology, CAS Center of Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.

University of Chinese Academy of Sciences, Beijing, China.

出版信息

Plant Biotechnol J. 2019 Feb;17(2):499-504. doi: 10.1111/pbi.12993. Epub 2018 Oct 5.

DOI:10.1111/pbi.12993
PMID:30051586
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6335069/
Abstract

Base editing is a novel genome editing strategy that enables irreversible base conversion at target loci without the need for double stranded break induction or homology-directed repair. Here, we developed new adenine and cytosine base editors with engineered SpCas9 and SaCas9 variants that substantially expand the targetable sites in the rice genome. These new base editors can edit endogenous genes in the rice genome with various efficiencies. Moreover, we show that adenine and cytosine base editing can be simultaneously executed in rice. The new base editors described here will be useful in rice functional genomics research and will advance precision molecular breeding in crops.

摘要

碱基编辑是一种新型的基因组编辑技术,可在无需双链断裂诱导或同源定向修复的情况下,实现靶向位点的不可逆碱基转换。在此,我们开发了新型的腺嘌呤碱基编辑器和胞嘧啶碱基编辑器,其所用的 SpCas9 和 SaCas9 变体经过了工程改造,从而极大地扩展了水稻基因组中的靶向位点。这些新的碱基编辑器可以以不同的效率编辑水稻基因组中的内源性基因。此外,我们还表明,腺嘌呤碱基编辑和胞嘧啶碱基编辑可以在水稻中同时进行。本文所描述的新型碱基编辑器将有助于水稻功能基因组学研究,并将推动作物的精准分子育种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5c2/11386502/6e8ac01e9728/PBI-17-499-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5c2/11386502/6e8ac01e9728/PBI-17-499-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5c2/11386502/6e8ac01e9728/PBI-17-499-g001.jpg

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本文引用的文献

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Highly efficient RNA-guided base editing in rabbit.高效的兔 RNA 引导碱基编辑。
Nat Commun. 2018 Jul 13;9(1):2717. doi: 10.1038/s41467-018-05232-2.
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Efficient generation of mouse models of human diseases via ABE- and BE-mediated base editing.通过 ABE 和 BE 介导的碱基编辑技术高效生成人类疾病的小鼠模型。
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Highly Efficient A·T to G·C Base Editing by Cas9n-Guided tRNA Adenosine Deaminase in Rice.利用Cas9n引导的tRNA腺苷脱氨酶在水稻中实现高效的A·T到G·C碱基编辑
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CRISPR/Cas9-mediated editing of jasmonic acid pathways to enhance biotic & abiotic stress tolerance: An overview & prospects.CRISPR/Cas9介导的茉莉酸途径编辑以增强生物和非生物胁迫耐受性:综述与展望
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A universal and wide-range cytosine base editor via domain-inlaid and fidelity-optimized CRISPR-FrCas9.一种通过结构域嵌入和保真度优化的CRISPR-FrCas9构建的通用且广范围的胞嘧啶碱基编辑器。
Nat Commun. 2025 Feb 1;16(1):1260. doi: 10.1038/s41467-025-56655-7.
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Integration of CRISPR/Cas9 with multi-omics technologies to engineer secondary metabolite productions in medicinal plant: Challenges and Prospects.CRISPR/Cas9 与多组学技术在药用植物次生代谢产物工程中的整合:挑战与展望。
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CRISPR/Cas system-mediated base editing in crops: recent developments and future prospects.CRISPR/Cas 系统介导的作物碱基编辑:最新进展与未来展望。
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