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基于综合生物信息学分析鉴定与胃癌发病机制及预后相关的潜在关键基因

Identification of Potential Key Genes Associated With the Pathogenesis and Prognosis of Gastric Cancer Based on Integrated Bioinformatics Analysis.

作者信息

Liu Xinkui, Wu Jiarui, Zhang Dan, Bing Zhitong, Tian Jinhui, Ni Mengwei, Zhang Xiaomeng, Meng Ziqi, Liu Shuyu

机构信息

Department of Clinical Chinese Pharmacy, School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.

Evidence Based Medicine Center, School of Basic Medical Science, Lanzhou University, Lanzhou, China.

出版信息

Front Genet. 2018 Jul 17;9:265. doi: 10.3389/fgene.2018.00265. eCollection 2018.

Abstract

Despite striking advances in multimodality management, gastric cancer (GC) remains the third cause of cancer mortality globally and identifying novel diagnostic and prognostic biomarkers is urgently demanded. The study aimed to identify potential key genes associated with the pathogenesis and prognosis of GC. Differentially expressed genes between GC and normal gastric tissue samples were screened by an integrated analysis of multiple gene expression profile datasets. Key genes related to the pathogenesis and prognosis of GC were identified by employing protein-protein interaction network and Cox proportional hazards model analyses. We identified nine hub genes (, and ) which might be tightly correlated with the pathogenesis of GC. A prognostic gene signature consisted of , and was constructed with a good performance in predicting overall survivals. The findings of this study would provide some directive significance for further investigating the diagnostic and prognostic biomarkers to facilitate the molecular targeting therapy of GC.

摘要

尽管在多模态管理方面取得了显著进展,但胃癌(GC)仍是全球癌症死亡的第三大原因,因此迫切需要鉴定新的诊断和预后生物标志物。本研究旨在鉴定与胃癌发病机制和预后相关的潜在关键基因。通过对多个基因表达谱数据集的综合分析,筛选出胃癌组织样本与正常胃组织样本之间的差异表达基因。利用蛋白质-蛋白质相互作用网络和Cox比例风险模型分析,鉴定出与胃癌发病机制和预后相关的关键基因。我们鉴定出9个可能与胃癌发病机制密切相关的枢纽基因(……)。构建了一个由……组成的预后基因特征,在预测总生存期方面表现良好。本研究结果将为进一步研究诊断和预后生物标志物以促进胃癌的分子靶向治疗提供一定的指导意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e94/6056647/5a542e66a410/fgene-09-00265-g001.jpg

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