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长链非编码RNA-AK012226参与db/db小鼠脂肪肝及非酒精性脂肪性肝病细胞模型中的脂肪积累过程。

LncRNA-AK012226 Is Involved in Fat Accumulation in db/db Mice Fatty Liver and Non-alcoholic Fatty Liver Disease Cell Model.

作者信息

Chen Xingtian, Xu Yangzhi, Zhao Dan, Chen Ting, Gu Chengxin, Yu Ganxiang, Chen Ken, Zhong Yun, He Jie, Liu Shiming, Nie Yuqiang, Yang Hui

机构信息

Department of Gastroenterology, The Second Affiliated Hospital of Guangzhou Medical University, Guangzhou, China.

Department of Cadre Health Care, Guangdong Pharmaceutical University, Guangzhou, China.

出版信息

Front Pharmacol. 2018 Aug 8;9:888. doi: 10.3389/fphar.2018.00888. eCollection 2018.

Abstract

Instances of obesity and related metabolic abnormalities are increasing across the world. Non-alcoholic fatty liver disease (NAFLD) is a common disorder in obese people and is becoming the leading cause of hepatocellular carcinoma. Recently, long non-coding RNAs (lncRNAs) have been proven to play remarkable roles in numerous biological processes and human diseases, including NAFLD. However, the function of lncRNA in NAFLD pathogenesis remains largely unknown. The aim of this study was to explore the lncRNA expression profile in NAFLD mice and to identify novel lncRNAs involved in the pathogenesis of NAFLD. We performed microarray analysis to compare the expression profiles of lncRNAs and mRNAs in the liver of diabetic db/db mice with NAFLD and normal mice. A total of 3360 lncRNAs (2048 up-regulated and 1312 down-regulated) and 2685 mRNAs (1195 up-regulated and 1490 down-regulated) were found to be differentially expressed between the NAFLD and control groups. Real-time PCR validation of five differentially expressed lncRNAs in the liver samples was consistent with the microarray results. Besides, the up-regulated lncRNA, AK012226, was also significantly increased in an NCTC1469 NAFLD cellular model. Thus, the up-regulated lncRNA, AK012226, was chosen for subsequent studies. A co-expression network of AK012226-mRNAs was constructed and bioinformatic analysis of these co-expressed mRNAs indicated that they were enriched in the PPAR signaling pathway. Furthermore, Nile red staining and flow cytometry analysis revealed that knockdown of AK012226 by siRNA significantly reduced the lipid accumulation in the NCTC1469 cells treated with free fatty acids. In conclusion, the present study identifies the dysregulated lncRNAs and mRNAs involved in NAFLD, and in particular, a novel lncRNA, AK012226, was identified to be associated with lipid accumulation in NAFLD.

摘要

肥胖及相关代谢异常的情况在全球范围内日益增多。非酒精性脂肪性肝病(NAFLD)是肥胖人群中的常见病症,且正成为肝细胞癌的主要病因。近来,长链非编码RNA(lncRNAs)已被证实可在包括NAFLD在内的众多生物学过程和人类疾病中发挥显著作用。然而,lncRNA在NAFLD发病机制中的功能仍大多未知。本研究旨在探究NAFLD小鼠中的lncRNA表达谱,并鉴定参与NAFLD发病机制的新型lncRNAs。我们进行了微阵列分析,以比较患有NAFLD的糖尿病db/db小鼠肝脏与正常小鼠肝脏中lncRNAs和mRNAs的表达谱。结果发现,NAFLD组和对照组之间共有3360个lncRNAs(2048个上调,1312个下调)和2685个mRNAs(1195个上调,1490个下调)存在差异表达。对肝脏样本中5个差异表达的lncRNAs进行实时PCR验证,结果与微阵列分析结果一致。此外,上调的lncRNA AK012226在NCTC1469 NAFLD细胞模型中也显著增加。因此,选择上调的lncRNA AK012226进行后续研究。构建了AK012226 - mRNAs共表达网络,对这些共表达mRNAs的生物信息学分析表明它们在PPAR信号通路中富集。此外,尼罗红染色和流式细胞术分析显示,用siRNA敲低AK012226可显著减少游离脂肪酸处理的NCTC1469细胞中的脂质积累。总之,本研究鉴定了参与NAFLD的失调lncRNAs和mRNAs,特别是鉴定出一种新型lncRNA AK012226与NAFLD中的脂质积累相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc76/6092710/606350aa915f/fphar-09-00888-g001.jpg

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