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拥挤和停顿强烈影响微管上肌球蛋白-1 分子马达的动力学。

Crowding and Pausing Strongly Affect Dynamics of Kinesin-1 Motors along Microtubules.

机构信息

Arnold Sommerfeld Center for Theoretical Physics and Center for NanoScience, Ludwig-Maximilians-Universität München, München, Germany.

Arnold Sommerfeld Center for Theoretical Physics and Center for NanoScience, Ludwig-Maximilians-Universität München, München, Germany.

出版信息

Biophys J. 2018 Sep 18;115(6):1068-1081. doi: 10.1016/j.bpj.2018.07.017. Epub 2018 Jul 25.

DOI:10.1016/j.bpj.2018.07.017
PMID:30146266
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6139881/
Abstract

Molecular motors of the kinesin-1 family move in a directed and processive fashion along microtubules. It is generally accepted that steric hindrance of motors leads to crowding effects; however, little is known about the specific interactions involved. We employ an agent-based lattice gas model to study the impact of interactions that enhance the detachment of motors from crowded filaments on their collective dynamics. The predictions of our model quantitatively agree with the experimentally observed concentration dependence of key motor characteristics including their run length, dwell time, velocity, and landing rate. From the anomalous stepping statistics of individual motors that exhibit relatively long pauses, we infer that kinesin-1 motors sometimes lapse into an inactive state. Hereby, the formation of traffic jams amplifies the impact of single inactive motors and leads to a crowding dependence of the frequencies and durations of the resulting periods of no or slow motion. We interpret these findings and conclude that kinesin-1 spends a significant fraction of its stepping cycle in a weakly bound state in which only one of its heads is bound to the microtubule.

摘要

驱动蛋白-1 家族的分子马达沿着微管定向和连续地运动。普遍认为,马达的空间位阻会导致拥挤效应;然而,关于具体的相互作用知之甚少。我们采用基于代理的格子气模型来研究增强马达从拥挤细丝上脱离的相互作用对其集体动力学的影响。我们模型的预测与实验观察到的关键马达特性的浓度依赖性定量一致,包括它们的运行长度、停留时间、速度和着陆率。从表现出相对长时间停顿的单个马达的异常步进统计数据中,我们推断出驱动蛋白-1 马达有时会进入不活跃状态。由此,交通堵塞放大了单个不活跃马达的影响,并导致无运动或缓慢运动的频率和持续时间的拥挤依赖性。我们解释了这些发现,并得出结论,驱动蛋白-1 在其步进循环的很大一部分时间里处于弱结合状态,其中只有一个头部与微管结合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/39418e96d500/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/491ba5eca1ec/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/61082a6063a0/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/d77f28747b71/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/38ec45fed894/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/39418e96d500/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/491ba5eca1ec/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/61082a6063a0/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/d77f28747b71/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/38ec45fed894/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/103b/6139881/39418e96d500/gr5.jpg

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