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癌症靶点亚硝基化的计算结构生物学

Computational Structural Biology of -nitrosylation of Cancer Targets.

作者信息

Bignon Emmanuelle, Allega Maria Francesca, Lucchetta Marta, Tiberti Matteo, Papaleo Elena

机构信息

Computational Biology Laboratory Danish Cancer Society Research Center, Copenhagen, Denmark.

Translational Disease Systems Biology, Faculty of Health and Medical Sciences, Novo Nordisk Foundation Center for Protein Research University of Copenhagen, Copenhagen, Denmark.

出版信息

Front Oncol. 2018 Aug 14;8:272. doi: 10.3389/fonc.2018.00272. eCollection 2018.

Abstract

Nitric oxide (NO) plays an essential role in redox signaling in normal and pathological cellular conditions. In particular, it is well known to react with cysteines by the so-called -nitrosylation reaction. -nitrosylation is a selective and reversible post-translational modification that exerts a myriad of different effects, such as the modulation of protein conformation, activity, stability, and biological interaction networks. We have appreciated, over the last years, the role of -nitrosylation in normal and disease conditions. In this context, structural and computational studies can help to dissect the complex and multifaceted role of this redox post-translational modification. In this review article, we summarized the current state-of-the-art on the mechanism of -nitrosylation, along with the structural and computational studies that have helped to unveil its effects and biological roles. We also discussed the need to move new steps forward especially in the direction of employing computational structural biology to address the molecular and atomistic details of -nitrosylation. Indeed, this redox modification has been so far an underappreciated redox post-translational modification by the computational biochemistry community. In our review, we primarily focus on -nitrosylated proteins that are attractive cancer targets due to the emerging relevance of this redox modification in a cancer setting.

摘要

一氧化氮(NO)在正常和病理细胞条件下的氧化还原信号传导中起着至关重要的作用。特别是,众所周知它通过所谓的亚硝基化反应与半胱氨酸发生反应。亚硝基化是一种选择性且可逆的翻译后修饰,会产生无数不同的影响,例如对蛋白质构象、活性、稳定性和生物相互作用网络的调节。在过去几年中,我们已经认识到亚硝基化在正常和疾病状态下的作用。在这种背景下,结构和计算研究有助于剖析这种氧化还原翻译后修饰的复杂和多方面的作用。在这篇综述文章中,我们总结了亚硝基化机制的当前最新进展,以及有助于揭示其作用和生物学功能的结构和计算研究。我们还讨论了尤其在利用计算结构生物学来解决亚硝基化的分子和原子细节方面向前迈出新步伐的必要性。事实上,到目前为止,这种氧化还原修饰在计算生物化学领域一直未得到充分重视。在我们的综述中,我们主要关注由于这种氧化还原修饰在癌症环境中的新出现的相关性而成为有吸引力的癌症靶点的亚硝基化蛋白。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dce8/6102371/981ec1f330ac/fonc-08-00272-g0001.jpg

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