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具有反复大奖事件的群体模型中出现选择似偏见。

Selection-Like Biases Emerge in Population Models with Recurrent Jackpot Events.

机构信息

Department of Physics, University of California, Berkeley, California 94720

Department of Integrative Biology, University of California, Berkeley, California 94720

出版信息

Genetics. 2018 Nov;210(3):1053-1073. doi: 10.1534/genetics.118.301516. Epub 2018 Aug 31.

Abstract

Evolutionary dynamics driven out of equilibrium by growth, expansion, or adaptation often generate a characteristically skewed distribution of descendant numbers: the earliest, the most advanced, or the fittest ancestors have exceptionally large number of descendants, which Luria and Delbrück called "jackpot" events. Here, I show that recurrent jackpot events generate a deterministic median bias favoring majority alleles, which is akin to positive frequency-dependent selection (proportional to the log ratio of the frequencies of mutant and wild-type alleles). This fictitious selection force results from the fact that majority alleles tend to sample deeper into the tail of the descendant distribution. The flip side of this sampling effect is the rare occurrence of large frequency hikes in favor of minority alleles, which ensures that the allele frequency dynamics remains neutral in expectation, unless genuine selection is present. The resulting picture of a selection-like bias compensated by rare big jumps allows for an intuitive understanding of allele frequency trajectories and enables the exact calculation of transition densities for a range of important scenarios, including population-size variations and different forms of natural selection. As a general signature of evolution by rare events, fictitious selection hampers the establishment of new beneficial mutations, counteracts balancing selection, and confounds methods to infer selection from data over limited timescales.

摘要

由生长、扩张或适应驱动的非平衡进化动力学常常产生具有特征性偏态分布的后代数量:最早、最先进或最适应的祖先具有异常多的后代,Luria 和 Delbrück 将其称为“ jackpot ”事件。在这里,我表明,反复出现的 jackpot 事件会产生有利于多数等位基因的确定性中位数偏差,类似于正频率依赖性选择(与突变型和野生型等位基因频率的对数比成正比)。这种虚构的选择力源于这样一个事实,即多数等位基因往往会深入采样后代分布的尾部。这种采样效应的另一面是少数等位基因中罕见的大频率跃升有利于少数等位基因,这确保了等位基因频率动力学在预期中保持中性,除非存在真正的选择。这种选择样偏差由罕见的大跳跃补偿的结果,为等位基因频率轨迹提供了直观的理解,并能够精确计算一系列重要场景(包括种群大小变化和不同形式的自然选择)的跃迁密度。作为稀有事件进化的一般特征,虚构选择会阻碍新有益突变的建立,抵制平衡选择,并混淆在有限时间尺度上从数据推断选择的方法。

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