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包装噬菌体基因组的可移动性控制着喷射动力学。

The mobility of packaged phage genome controls ejection dynamics.

机构信息

Department of Pathobiology, Division of Microbiology and Immunology, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, United States.

Department of Experimental Medical Sciences, Virus Biophysics Group, Lund University, Lund, Sweden.

出版信息

Elife. 2018 Sep 4;7:e37345. doi: 10.7554/eLife.37345.

DOI:10.7554/eLife.37345
PMID:30178745
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6122950/
Abstract

The cell decision between lytic and lysogenic infection is strongly influenced by dynamics of DNA injection into a cell from a phage population, as phages compete for limited resources and progeny. However, what controls the timing of viral DNA ejection events was not understood. This in vitro study reveals that DNA ejection dynamics for phages can be synchronized (occurring within seconds) or desynchronized (displaying minutes-long delays in initiation) based on mobility of encapsidated DNA, which in turn is regulated by environmental factors, such as temperature and extra-cellular ionic conditions. This mechano-regulation of ejection dynamics is suggested to influence viral replication where the cell's decision between lytic and latent infection is associated with synchronized or desynchronized delayed ejection events from phage population adsorbed to a cell. Our findings are of significant importance for understanding regulatory mechanisms of latency in phage and Herpesviruses, where encapsidated DNA undergoes a similar mechanical transition.

摘要

细胞是选择裂解感染还是溶源感染,主要取决于噬菌体群体向细胞内注射 DNA 的动力学,因为噬菌体在竞争有限的资源和后代。然而,控制病毒 DNA 喷射事件时间的因素尚不清楚。本体外研究表明,噬菌体的 DNA 喷射动力学可以根据包被 DNA 的迁移性进行同步(在几秒钟内发生)或不同步(启动时间延迟几分钟),而包被 DNA 的迁移性又受环境因素(如温度和细胞外离子条件)的调节。这种喷射动力学的机械调节被认为会影响病毒复制,其中细胞裂解感染和潜伏感染之间的决定与吸附在细胞上的噬菌体群体中同步或不同步的延迟喷射事件有关。我们的发现对于理解噬菌体和疱疹病毒潜伏的调控机制具有重要意义,因为包被 DNA 会经历类似的力学转变。

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本文引用的文献

1
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Biophys J. 2017 Nov 7;113(9):2110-2120. doi: 10.1016/j.bpj.2017.09.012.
2
Fate-Regulating Circuits in Viruses: From Discovery to New Therapy Targets.病毒中的命运调控回路:从发现到新的治疗靶点。
Annu Rev Virol. 2017 Sep 29;4(1):469-490. doi: 10.1146/annurev-virology-110615-035606. Epub 2017 Aug 11.
3
CRISPR-Cas systems exploit viral DNA injection to establish and maintain adaptive immunity.CRISPR-Cas系统利用病毒DNA注入来建立和维持适应性免疫。
人类肠道粗病毒的结构图谱。
Nature. 2023 May;617(7960):409-416. doi: 10.1038/s41586-023-06019-2. Epub 2023 May 3.
4
An Overview of Diverse Strategies To Inactivate -Targeting Bacteriophages.靶向噬菌体的多种灭活策略概述
EcoSal Plus. 2023 Dec 12;11(1):eesp00192022. doi: 10.1128/ecosalplus.esp-0019-2022. Epub 2023 Jan 18.
5
Mechanical Constraint Effect on DNA Persistence Length.机械约束对 DNA 持久长度的影响。
Molecules. 2022 Nov 11;27(22):7769. doi: 10.3390/molecules27227769.
6
Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.噬菌体 SU10 的尾部蛋白重组成基因组传递的喷口。
Nat Commun. 2022 Sep 24;13(1):5622. doi: 10.1038/s41467-022-33305-w.
7
Biological foundations of successful bacteriophage therapy.成功噬菌体疗法的生物学基础。
EMBO Mol Med. 2022 Jul 7;14(7):e12435. doi: 10.15252/emmm.202012435. Epub 2022 May 27.
8
Predicting the capsid architecture of phages from metagenomic data.从宏基因组数据预测噬菌体的衣壳结构。
Comput Struct Biotechnol J. 2022 Jan 5;20:721-732. doi: 10.1016/j.csbj.2021.12.032. eCollection 2022.
9
Intravirion DNA Can Access the Space Occupied by the Bacteriophage P22 Ejection Proteins.病毒粒子内的 DNA 可以进入噬菌体 P22 排出蛋白所占据的空间。
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Nature. 2017 Apr 6;544(7648):101-104. doi: 10.1038/nature21719. Epub 2017 Mar 29.
4
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5
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6
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