Suppr超能文献

OpenWorm:整体概述及综合生物模拟的最新进展

OpenWorm: overview and recent advances in integrative biological simulation of .

机构信息

School of Medicine, Emory University, Atlanta, GA, USA.

The OpenWorm Foundation, New York, NY, USA.

出版信息

Philos Trans R Soc Lond B Biol Sci. 2018 Sep 10;373(1758):20170382. doi: 10.1098/rstb.2017.0382.

Abstract

The adoption of powerful software tools and computational methods from the software industry by the scientific research community has resulted in a renewed interest in integrative, large-scale biological simulations. These typically involve the development of computational platforms to combine diverse, process-specific models into a coherent whole. The OpenWorm Foundation is an independent research organization working towards an integrative simulation of the nematode , with the aim of providing a powerful new tool to understand how the organism's behaviour arises from its fundamental biology. In this perspective, we give an overview of the history and philosophy of OpenWorm, descriptions of the constituent sub-projects and corresponding open-science management practices, and discuss current achievements of the project and future directions.This article is part of a discussion meeting issue 'Connectome to behaviour: modelling at cellular resolution'.

摘要

科学界采用了来自软件行业的强大软件工具和计算方法,这使得人们重新对综合性的大规模生物模拟产生了兴趣。这些模拟通常涉及开发计算平台,将不同的、特定于流程的模型组合成一个连贯的整体。OpenWorm 基金会是一个独立的研究组织,致力于对秀丽隐杆线虫进行综合模拟,旨在提供一个强大的新工具,以了解生物体的行为如何从其基本生物学中产生。在这篇观点文章中,我们概述了 OpenWorm 的历史和哲学,描述了组成子项目和相应的开放科学管理实践,并讨论了该项目的当前成就和未来方向。本文是“从细胞分辨率到行为的连接组:建模”讨论会议议题的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54c0/6158220/cade92da1cea/rstb20170382-g1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验