Jiangsu Key Laboratory for Bioresources of Saline Soils, Jiangsu Synthetic Innovation Center for Coastal Bio-agriculture, Jiangsu Provincial Key Laboratory of Coastal Wetland Bioresources and Environmental Protection, School of Ocean and Biological Engineering, Yancheng Teachers University, Yancheng, Jiangsu 224007, People's Republic of China; School of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou 325035, People's Republic of China; Marine Science and Technology College, Zhejiang Ocean University, Zhoushan 316022, People's Republic of China.
Jiangsu Key Laboratory for Bioresources of Saline Soils, Jiangsu Synthetic Innovation Center for Coastal Bio-agriculture, Jiangsu Provincial Key Laboratory of Coastal Wetland Bioresources and Environmental Protection, School of Ocean and Biological Engineering, Yancheng Teachers University, Yancheng, Jiangsu 224007, People's Republic of China; College of Biotechnology and Pharmaceutical Engineering, Nanjing University of Technology, Nanjing 210009, People's Republic of China.
Int J Biol Macromol. 2019 Mar 15;125:1257-1265. doi: 10.1016/j.ijbiomac.2018.09.104. Epub 2018 Sep 19.
The mitochondrial genome (mitogenome) plays an important role in revealing molecular evolution. In this study, the complete mitogenome of Grammodes geometrica (G. geometrica) (Lepidoptera: Erebidae) was sequenced and characterized. The nucleotide composition of the genome is highly A + T biased, accounting for 80.49%. Most protein-coding genes (PCGs) are initiated by ATN codons except for the cytochrome oxidase subunit 1 (cox1) gene, which was initiated by CGA. The order and orientation of genes with the order trnM-trnI-trnQ-nad2 is a typical rearrangement compared with those ancestral insects in which trnM is located between trnQ and nad2. Most tRNA genes were folded into the typical cloverleaf structure except for trnS1 (AGN). The A + T-rich region contains the conserved motif "ATAGA" followed by a 19 bp poly-T stretch, which was also observed in other Noctuoidea species. In addition, we reconstructed phylogenetic trees among the nucleotide alignments of five families of Noctuoidea species except the Oenosandridae. Finally, we achieved a well-supported tree, which showed that G. geometrica belongs to the Erebidae family. Moreover, the relationships at the family-level can be displayed as follows: (Notodontidae + (Erebidae + (Nolidae + (Euteliidae + Noctuidae)))).
线粒体基因组(mitogenome)在揭示分子进化方面起着重要作用。在这项研究中,我们对Grammodes geometrica(G. geometrica)(鳞翅目:夜蛾科)的完整线粒体基因组进行了测序和特征描述。基因组的核苷酸组成高度偏向 A+T,占 80.49%。大多数蛋白质编码基因(PCGs)以 ATN 密码子起始,除了细胞色素氧化酶亚基 1(cox1)基因,它以 CGA 起始。与那些 trnM 位于 trnQ 和 nad2 之间的祖先昆虫相比,trnM-trnI-trnQ-nad2 基因的排列和方向是一种典型的重排。大多数 tRNA 基因折叠成典型的三叶草结构,除了 trnS1(AGN)。富含 A+T 的区域包含保守的“ATAGA”基序,后面跟着一个 19bp 的多 T 延伸,这也在其他夜蛾总科物种中观察到。此外,我们在除了 Oenosandridae 之外的五个夜蛾总科物种的核苷酸比对中构建了系统发育树。最后,我们得到了一个支持度较好的树,表明 G. geometrica 属于夜蛾科。此外,在科水平上的关系可以表示为:(Notodontidae+(Erebidae+(Nolidae+(Euteliidae+Noctuidae))))。