School of Pharmacy and Bioengineering, Chengdu University, Chengdu, 610106, China.
School of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
BMC Microbiol. 2018 Oct 17;18(1):134. doi: 10.1186/s12866-018-1271-z.
Ganzi Prefecture in Western China is situated geographically at the transition regions between Tibetan Plateau and Sichuan Basin in a highly tectonically active boundary area between the India and Eurasia plates. The region hosts various hot springs that span a wide range of temperature from 30 to 98 °C and are located at high altitude (up to 4200 m above sea level) in the region of large geothermal anomalies and active Xianshuihe slip-fault that has been active since Holocene. The site represents a biodiversity reservoir for thermophiles, yet their diversity and relationship to geochemical parameters are largely unknown. In the present work, bacterial diversity and community structure in 14 hot springs of Ganzi were investigated using Illumina MiSeq sequencing.
Bacterial community compositions were evidently distinct among the 14 hot springs, and the bacterial communities in hot springs were majorly abundant in phyla Aquificae, Cyanobacteria and Proteobacteria. Both clustering and PCoA analysis suggested the existence of four bacterial community patterns in these hot springs. Temperature contributed to shaping bacterial community structure of hot springs as revealed by correlation analysis. Abundant unassigned-genus sequences detected in this study strongly implied the presence of novel genera or genetic resources in these hot springs.
The diversity of hot springs of Ganzi prefecture in Western Sichuan, China is evidently shaped by temperature. Interestingly disproportionally abundant unassigned-genus sequences detected in this study show indicate potential of novel genera or phylotypes. We hypothesize that frequent earthquakes and rapidly changing environment might have contributed to evolution of these potentially new lineages. Overall, this study provided first insight into the bacterial diversity of hot springs located in Western Sichuan, China and its comparison with other similar communities worldwide.
中国西部的甘孜藏族自治州位于青藏高原和四川盆地的过渡地带,处于印度板块和欧亚板块之间高度构造活跃的边界地区。该地区拥有各种温泉,温度范围从 30 到 98°C,位于大型地热异常和全新世以来一直活跃的鲜水河滑动断层的高海拔地区(海拔高达 4200 米)。该地区是嗜热微生物的生物多样性库,但它们的多样性及其与地球化学参数的关系在很大程度上尚未可知。在本研究中,采用 Illumina MiSeq 测序技术研究了甘孜 14 个温泉中的细菌多样性和群落结构。
14 个温泉的细菌群落组成明显不同,温泉中的细菌群落主要丰富于泉古菌门、蓝细菌门和变形菌门。聚类和 PCoA 分析表明,这些温泉中存在四种细菌群落模式。相关性分析表明,温度是温泉细菌群落结构形成的主要因素。本研究中检测到大量未分类的属序列,强烈暗示这些温泉中存在新的属或遗传资源。
中国川西甘孜地区温泉的多样性明显受到温度的影响。有趣的是,本研究中检测到的大量不成比例的未分类属序列表明存在潜在的新属或菌型。我们假设频繁的地震和快速变化的环境可能促成了这些潜在新谱系的进化。总的来说,本研究首次深入了解了中国川西温泉的细菌多样性,并与世界其他类似群落进行了比较。