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双蛋白反应扩散系统中的静止模式

Stationary Patterns in a Two-Protein Reaction-Diffusion System.

作者信息

Glock Philipp, Ramm Beatrice, Heermann Tamara, Kretschmer Simon, Schweizer Jakob, Mücksch Jonas, Alagöz Gökberk, Schwille Petra

机构信息

Cellular and Molecular Biophysics , Max-Planck-Institut für Biochemie , Martinsried 82152 , Germany.

出版信息

ACS Synth Biol. 2019 Jan 18;8(1):148-157. doi: 10.1021/acssynbio.8b00415. Epub 2019 Jan 3.

Abstract

Patterns formed by reaction-diffusion mechanisms are crucial for the development or sustenance of most organisms in nature. Patterns include dynamic waves, but are more often found as static distributions, such as animal skin patterns. Yet, a simplistic biological model system to reproduce and quantitatively investigate static reaction-diffusion patterns has been missing so far. Here, we demonstrate that the Escherichia coli Min system, known for its oscillatory behavior between the cell poles, is under certain conditions capable of transitioning to quasi-stationary protein distributions on membranes closely resembling Turing patterns. We systematically titrated both proteins, MinD and MinE, and found that removing all purification tags and linkers from the N-terminus of MinE was critical for static patterns to occur. At small bulk heights, dynamic patterns dominate, such as in rod-shaped microcompartments. We see implications of this work for studying pattern formation in general, but also for creating artificial gradients as downstream cues in synthetic biology applications.

摘要

由反应-扩散机制形成的模式对于自然界中大多数生物体的发育或维持至关重要。这些模式包括动态波,但更常见的是静态分布,如动物皮肤图案。然而,迄今为止,还缺少一个简单的生物模型系统来重现和定量研究静态反应-扩散模式。在这里,我们证明,以在细胞两极之间的振荡行为而闻名的大肠杆菌Min系统,在某些条件下能够转变为膜上类似于图灵模式的准静态蛋白质分布。我们系统地滴定了MinD和MinE这两种蛋白质,发现从MinE的N端去除所有纯化标签和接头对于静态模式的出现至关重要。在较小的本体高度下,动态模式占主导,例如在杆状微区室中。我们认为这项工作不仅对一般模式形成的研究有意义,而且对在合成生物学应用中创建作为下游线索的人工梯度也有意义。

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