Decker Daniel, Kleczkowski Leszek A
Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, Umeå, Sweden.
Front Plant Sci. 2019 Jan 4;9:1822. doi: 10.3389/fpls.2018.01822. eCollection 2018.
Nucleotide sugars are the key precursors for all glycosylation reactions and are required both for oligo- and polysaccharides synthesis and protein and lipid glycosylation. Among all nucleotide sugars, UDP-sugars are the most important precursors for biomass production in nature (e.g., synthesis of cellulose, hemicellulose, and pectins for cell wall production). Several recent studies have already suggested a potential role for UDP-Glc in plant growth and development, and UDP-Glc has also been suggested as a signaling molecule, in addition to its precursor function. In this review, we will cover primary mechanisms of formation of UDP-sugars, by focusing on UDP-sugar metabolizing pyrophosphorylases. The pyrophosphorylases can be divided into three families: UDP-Glc pyrophosphorylase (UGPase), UDP-sugar pyrophosphorylase (USPase), and UDP--acetyl glucosamine pyrophosphorylase (UAGPase), which can be distinguished both by their amino acid sequences and by differences in substrate specificity. Substrate specificities of these enzymes are discussed, along with structure-function relationships, based on their crystal structures and homology modeling. Earlier studies with transgenic plants have revealed that each of the pyrophosphorylases is essential for plant survival, and their loss or a decrease in activity results in reproductive impairment. This constitutes a problem when studying exact roles of the enzymes using classical reverse genetics approaches. Thus, strategies involving the use of specific inhibitors (reverse chemical genetics) are also discussed. Further characterization of the properties/roles of pyrophosphorylases should address fundamental questions dealing with mechanisms and control of carbohydrate synthesis and may allow to identify targets for manipulation of biomass production in plants.
核苷酸糖是所有糖基化反应的关键前体,在寡糖和多糖合成以及蛋白质和脂质糖基化过程中均不可或缺。在所有核苷酸糖中,UDP-糖是自然界生物量生产中最重要的前体(例如,用于细胞壁生产的纤维素、半纤维素和果胶的合成)。最近的几项研究已经表明UDP-葡萄糖在植物生长和发育中具有潜在作用,并且除了其前体功能外,UDP-葡萄糖还被认为是一种信号分子。在本综述中,我们将重点关注UDP-糖代谢焦磷酸化酶,探讨UDP-糖形成的主要机制。焦磷酸化酶可分为三个家族:UDP-葡萄糖焦磷酸化酶(UGPase)、UDP-糖焦磷酸化酶(USPase)和UDP-N-乙酰葡萄糖胺焦磷酸化酶(UAGPase),它们可通过氨基酸序列以及底物特异性的差异来区分。基于这些酶的晶体结构和同源建模,讨论了它们的底物特异性以及结构-功能关系。早期对转基因植物的研究表明,每种焦磷酸化酶对植物存活都是必不可少的,其活性的丧失或降低会导致生殖障碍。这在使用经典反向遗传学方法研究这些酶的确切作用时构成了一个问题。因此,还讨论了涉及使用特异性抑制剂的策略(反向化学遗传学)。对焦磷酸化酶性质/作用的进一步表征应解决与碳水化合物合成机制和调控相关的基本问题,并可能有助于确定操纵植物生物量生产的靶点。