Corre Marie-Hélène, Delafont Vincent, Legrand Anasthasia, Berjeaud Jean-Marc, Verdon Julien
Laboratoire Ecologie et Biologie des Interactions, UMR CNRS 7267, Université de Poitiers, Poitiers, France.
Front Microbiol. 2019 Jan 15;9:3360. doi: 10.3389/fmicb.2018.03360. eCollection 2018.
is one of the most tracked waterborne pathogens and remains an important threat to human health. Despite the use of biocides, is able to persist in engineered water systems with the help of multispecies biofilms and phagocytic protists. For few years now, high-throughput sequencing methods have enabled a better understanding of microbial communities in freshwater environments. Those unexplored and complex communities compete for nutrients using antagonistic molecules as war weapons. Up to now, few of these molecules were characterized in regards of sensitivity. In this context, we established, from five freshwater environments, a vast collection of culturable bacteria and investigated their ability to inhibit the growth of . All bacterial isolates were classified within 4 phyla, namely Proteobacteria (179/273), Bacteroidetes (48/273), Firmicutes (43/273), and Actinobacteria (3/273) according to 16S rRNA coding sequences. , , , and were the most abundant genera (154/273). Among the 273 isolates, 178 (65.2%) were shown to be active against including 137 isolates of the four previously cited main genera. Additionally, other less represented genera depicted anti- activity such as , , , or . Furthermore, various inhibition diameters were observed among active isolates, ranging from 0.4 to 9 cm. Such variability suggests the presence of numerous and diverse natural compounds in the microenvironment of . These molecules include both diffusible secreted compounds and volatile organic compounds, the latter being mainly produced by strains. Altogether, this work sheds light on unexplored freshwater bacterial communities that could be relevant for the biological control of in manmade water systems.
是最受关注的水传播病原体之一,仍然对人类健康构成重大威胁。尽管使用了杀菌剂,但在多物种生物膜和吞噬性原生生物的帮助下,它仍能在工程水系统中持续存在。近年来,高通量测序方法使人们能够更好地了解淡水环境中的微生物群落。这些未被探索的复杂群落利用拮抗分子作为战争武器争夺营养。到目前为止,关于其敏感性,这些分子中很少有被表征的。在此背景下,我们从五个淡水环境中建立了一个庞大的可培养细菌库,并研究了它们抑制其生长的能力。根据16S rRNA编码序列,所有细菌分离株被分为4个门,即变形菌门(179/273)、拟杆菌门(48/273)、厚壁菌门(43/273)和放线菌门(3/273)。、、、和是最丰富的属(154/273)。在273个分离株中,有178个(65.2%)被证明对有活性,其中包括上述四个主要属的137个分离株。此外,其他代表性较低的属也表现出抗活性,如、、、或。此外,在有活性的分离株中观察到了不同的抑制直径,范围从0.4到9厘米。这种变异性表明在其微环境中存在大量多样的天然化合物。这些分子包括可扩散的分泌化合物和挥发性有机化合物,后者主要由菌株产生。总之,这项工作揭示了未被探索的淡水细菌群落,这些群落可能与人工水系统中的生物控制相关。