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基于卷积神经网络和迁移学习的彩色眼底图像自动青光眼分类

Automatic glaucoma classification using color fundus images based on convolutional neural networks and transfer learning.

作者信息

Gómez-Valverde Juan J, Antón Alfonso, Fatti Gianluca, Liefers Bart, Herranz Alejandra, Santos Andrés, Sánchez Clara I, Ledesma-Carbayo María J

机构信息

Biomedical Image Technologies Laboratory (BIT), ETSI Telecomunicación, Universidad Politécnica de Madrid, 28040 Madrid, Spain.

Biomedical Research Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Spain.

出版信息

Biomed Opt Express. 2019 Jan 25;10(2):892-913. doi: 10.1364/BOE.10.000892. eCollection 2019 Feb 1.

DOI:10.1364/BOE.10.000892
PMID:30800522
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6377910/
Abstract

Glaucoma detection in color fundus images is a challenging task that requires expertise and years of practice. In this study we exploited the application of different Convolutional Neural Networks (CNN) schemes to show the influence in the performance of relevant factors like the data set size, the architecture and the use of transfer learning vs newly defined architectures. We also compared the performance of the CNN based system with respect to human evaluators and explored the influence of the integration of images and data collected from the clinical history of the patients. We accomplished the best performance using a transfer learning scheme with VGG19 achieving an AUC of 0.94 with sensitivity and specificity ratios similar to the expert evaluators of the study. The experimental results using three different data sets with 2313 images indicate that this solution can be a valuable option for the design of a computer aid system for the detection of glaucoma in large-scale screening programs.

摘要

在彩色眼底图像中检测青光眼是一项具有挑战性的任务,需要专业知识和多年实践经验。在本研究中,我们利用不同的卷积神经网络(CNN)方案来展示数据集大小、架构以及迁移学习与新定义架构的使用等相关因素对性能的影响。我们还将基于CNN的系统性能与人类评估者进行了比较,并探讨了整合从患者临床病史中收集的图像和数据的影响。我们使用带有VGG19的迁移学习方案实现了最佳性能,AUC为0.94,灵敏度和特异性比率与该研究的专家评估者相似。使用包含2313张图像的三个不同数据集的实验结果表明,该解决方案对于大规模筛查项目中青光眼检测的计算机辅助系统设计可能是一个有价值的选择。

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本文引用的文献

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Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs.深度学习架构和迁移学习在眼底照片中检测青光眼视神经病变的性能。
Sci Rep. 2018 Nov 12;8(1):16685. doi: 10.1038/s41598-018-35044-9.
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Development of a deep residual learning algorithm to screen for glaucoma from fundus photography.开发一种深度学习算法,用于从眼底摄影中筛选青光眼。
Sci Rep. 2018 Oct 2;8(1):14665. doi: 10.1038/s41598-018-33013-w.
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Disc-Aware Ensemble Network for Glaucoma Screening From Fundus Image.基于眼底图像的青光眼筛查的 Disc-Aware 集成网络。
IEEE Trans Med Imaging. 2018 Nov;37(11):2493-2501. doi: 10.1109/TMI.2018.2837012. Epub 2018 May 15.
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Joint Optic Disc and Cup Segmentation Based on Multi-Label Deep Network and Polar Transformation.基于多标签深度网络和极坐标变换的联合视盘和杯分割。
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Predicting cancer outcomes from histology and genomics using convolutional networks.使用卷积网络从组织学和基因组学预测癌症结局。
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Efficacy of a Deep Learning System for Detecting Glaucomatous Optic Neuropathy Based on Color Fundus Photographs.基于眼底彩色照片的深度学习系统检测青光眼视神经病变的效果。
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