• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

产油酵母（同义词： ）DSM 27194的基因组序列草图。

Draft Genome Sequence of the Oleaginous Yeast (syn. ) DSM 27194.

作者信息

Gorte Olga, Aliyu Habibu, Neumann Anke, Ochsenreither Katrin

机构信息

Institute of Process engineering in Life Science 2: Technical Biology, Karlsruhe Institute of Technology, Germany.

出版信息

J Genomics. 2019 Jan 29;7:11-13. doi: 10.7150/jgen.32210. eCollection 2019.

DOI:10.7150/jgen.32210
PMID:30820256
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6389497/
Abstract

Here, we present the draft genome sequence of DSM 27194 generated on PacBio platform. Characterization of this oleaginous yeast originally collected from the grassland in Karlsruhe Germany, revealed potential for its utilization as a source of single cell oil (SCO) and gluconic acid (GA). The availability of the genome sequence provides a valuable resource for the elucidation of the genetic processes determining SCO and GA biosynthesis.

摘要

在此，我们展示了在PacBio平台上生成的DSM 27194的基因组序列草图。对这种最初从德国卡尔斯鲁厄草原采集的产油酵母的特性进行研究后发现，它有潜力作为单细胞油（SCO）和葡萄糖酸（GA）的来源。基因组序列的可得性为阐明决定SCO和GA生物合成的遗传过程提供了宝贵资源。

相似文献

1
Draft Genome Sequence of the Oleaginous Yeast (syn. ) DSM 27194.产油酵母（同义词： ）DSM 27194的基因组序列草图。
J Genomics. 2019 Jan 29;7:11-13. doi: 10.7150/jgen.32210. eCollection 2019.
2
Evaluation of Downstream Processing, Extraction, and Quantification Strategies for Single Cell Oil Produced by the Oleaginous Yeasts DSM 27192 and DSM 27194.对产油酵母DSM 27192和DSM 27194生产的单细胞油的下游加工、提取及定量策略的评估
Front Bioeng Biotechnol. 2020 Apr 24;8:355. doi: 10.3389/fbioe.2020.00355. eCollection 2020.
3
Draft Genome Sequence of the Oleaginous Yeast (syn. ) DSM 27192.产油酵母（同义词： ）DSM 27192的基因组序列草图。
Microbiol Resour Announc. 2019 Feb 21;8(8). doi: 10.1128/MRA.01676-18. eCollection 2019 Feb.
4
Characterization of newly isolated oleaginous yeasts - Cryptococcus podzolicus, Trichosporon porosum and Pichia segobiensis.新型产油酵母——圆酵母、多孔被孢霉和毕赤酵母的特性研究。
AMB Express. 2014 Mar 18;4:24. doi: 10.1186/s13568-014-0024-0. eCollection 2014.
5
Trichosporon porosum comb. nov., an anamorphic basidiomycetous yeast inhabiting soil, related to the loubieri/laibachii group of species that assimilate hemicelluloses and phenolic compounds.多孔丝孢酵母，新组合，一种栖息于土壤的无性型担子菌酵母，与同化半纤维素和酚类化合物的卢氏/莱巴赫氏菌群物种相关。
FEMS Yeast Res. 2001 Apr;1(1):15-22. doi: 10.1111/j.1567-1364.2001.tb00009.x.
6
Co-production of single cell oil and gluconic acid using oleaginous DSM 27192.利用产油微生物DSM 27192联产单细胞油和葡萄糖酸。
Biotechnol Biofuels. 2019 May 21;12:127. doi: 10.1186/s13068-019-1469-9. eCollection 2019.
7
Comparative genome analysis of the oleaginous yeast Trichosporon fermentans reveals its potential applications in lipid accumulation.产油酵母发酵性丝孢酵母的比较基因组分析揭示了其在脂质积累方面的潜在应用。
Microbiol Res. 2016 Nov;192:203-210. doi: 10.1016/j.micres.2016.07.005. Epub 2016 Jul 21.
8
Draft Genome Sequence of Cutaneotrichosporon curvatus DSM 101032 (Formerly Cryptococcus curvatus), an Oleaginous Yeast Producing Polyunsaturated Fatty Acids.产多不饱和脂肪酸的油脂酵母弯状皮生丝孢酵母DSM 101032（以前称为弯隐球菌）的基因组序列草图
Genome Announc. 2016 May 12;4(3):e00362-16. doi: 10.1128/genomeA.00362-16.
9
Draft Genome Sequence of Cryptococcus terricola JCM 24523, an Oleaginous Yeast Capable of Expressing Exogenous DNA.土壤隐球菌JCM 24523的基因组序列草图，一种能够表达外源DNA的产油酵母
Genome Announc. 2016 Nov 3;4(6):e01238-16. doi: 10.1128/genomeA.01238-16.
10
Oleaginous yeast: a value-added platform for renewable oils.油脂酵母：可再生油脂的增值平台。
Crit Rev Biotechnol. 2016 Oct;36(5):942-55. doi: 10.3109/07388551.2015.1064855. Epub 2015 Jul 16.

引用本文的文献

1
Lipid Production from Native Oleaginous Yeasts Isolated from Southern Chilean Soil Cultivated in Industrial Vinasse Residues.从智利南部土壤中分离出的原生产油酵母在工业酒糟残渣中培养时的脂质生产。
Microorganisms. 2023 Oct 9;11(10):2516. doi: 10.3390/microorganisms11102516.
2
Analysis of the bacterial and fungal populations in South African sorghum beer (umqombothi) using full-length 16S rRNA amplicon sequencing.使用全长 16S rRNA 扩增子测序分析南非高粱啤酒（umqombothi）中的细菌和真菌种群。
World J Microbiol Biotechnol. 2023 Oct 21;39(12):350. doi: 10.1007/s11274-023-03764-4.
3
IMA Genome - F16 : Draft genome assemblies of Fusarium marasasianum, Huntiella abstrusa, two Immersiporthe knoxdaviesiana isolates, Macrophomina pseudophaseolina, Macrophomina phaseolina, Naganishia randhawae, and Pseudocercospora cruenta.

本文引用的文献

1
BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics.BUSCO的应用：从质量评估到基因预测和系统发育基因组学
Mol Biol Evol. 2018 Mar 1;35(3):543-548. doi: 10.1093/molbev/msx319.
2
Oleaginous yeasts: Promising platforms for the production of oleochemicals and biofuels.产油酵母：生产油脂化学品和生物燃料的理想平台。
Biotechnol Bioeng. 2017 Sep;114(9):1915-1920. doi: 10.1002/bit.26337. Epub 2017 May 29.
3
SMS: Smart Model Selection in PhyML.SMS：PhyML中的智能模型选择。
IMA基因组 - F16：拟轮枝镰孢、隐匿亨蒂霉、两种诺克斯戴维斯浸生座囊菌分离株、菜豆壳球孢、菜豆壳二孢、兰氏纳格孢和菜豆假尾孢的基因组草图组装
IMA Fungus. 2022 Feb 23;13(1):3. doi: 10.1186/s43008-022-00089-z.
4
Complete Genome Sequencing and Comparative Analysis of the Clinically-Derived Strain GMU1709.临床分离株 GMU1709 的全基因组测序及比较分析。
Front Cell Infect Microbiol. 2022 Feb 4;12:834015. doi: 10.3389/fcimb.2022.834015. eCollection 2022.
5
Evaluation of Downstream Processing, Extraction, and Quantification Strategies for Single Cell Oil Produced by the Oleaginous Yeasts DSM 27192 and DSM 27194.对产油酵母DSM 27192和DSM 27194生产的单细胞油的下游加工、提取及定量策略的评估
Front Bioeng Biotechnol. 2020 Apr 24;8:355. doi: 10.3389/fbioe.2020.00355. eCollection 2020.
6
Genomic insights into the lifestyles, functional capacities and oleagenicity of members of the fungal family Trichosporonaceae.真菌科毛孢子菌属成员的生活方式、功能能力和产油能力的基因组见解。
Sci Rep. 2020 Feb 17;10(1):2780. doi: 10.1038/s41598-020-59672-2.
7
Convergent evolution of linked mating-type loci in basidiomycete fungi.担子菌真菌中与交配型相关联的基因座的趋同进化。
PLoS Genet. 2019 Sep 6;15(9):e1008365. doi: 10.1371/journal.pgen.1008365. eCollection 2019 Sep.
Mol Biol Evol. 2017 Sep 1;34(9):2422-2424. doi: 10.1093/molbev/msx149.
4
Canu: scalable and accurate long-read assembly via adaptive -mer weighting and repeat separation.Canu：通过自适应k-mer加权和重复序列分离实现可扩展且准确的长读长序列拼接
Genome Res. 2017 May;27(5):722-736. doi: 10.1101/gr.215087.116. Epub 2017 Mar 15.
5
Production Strategies and Applications of Microbial Single Cell Oils.微生物单细胞油脂的生产策略与应用
Front Microbiol. 2016 Oct 5;7:1539. doi: 10.3389/fmicb.2016.01539. eCollection 2016.
6
Comparative genome analysis of the oleaginous yeast Trichosporon fermentans reveals its potential applications in lipid accumulation.产油酵母发酵性丝孢酵母的比较基因组分析揭示了其在脂质积累方面的潜在应用。
Microbiol Res. 2016 Nov;192:203-210. doi: 10.1016/j.micres.2016.07.005. Epub 2016 Jul 21.
7
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy.OrthoFinder：解决全基因组比较中的基本偏差可显著提高直系同源组推断准确性。
Genome Biol. 2015 Aug 6;16(1):157. doi: 10.1186/s13059-015-0721-2.
8
Characterization of newly isolated oleaginous yeasts - Cryptococcus podzolicus, Trichosporon porosum and Pichia segobiensis.新型产油酵母——圆酵母、多孔被孢霉和毕赤酵母的特性研究。
AMB Express. 2014 Mar 18;4:24. doi: 10.1186/s13568-014-0024-0. eCollection 2014.
9
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.非杂交、基于长读长 SMRT 测序数据的完成微生物基因组组装。
Nat Methods. 2013 Jun;10(6):563-9. doi: 10.1038/nmeth.2474. Epub 2013 May 5.
10
Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures.使用 T-Coffee 包构建蛋白质、RNA、DNA 序列和 3D 结构的多重序列比对。
Nat Protoc. 2011 Nov;6(11):1669-82. doi: 10.1038/nprot.2011.393.