Suppr超能文献

不同静压和温度暴露下的 Eogammarus possjeticus 的比较转录组分析。

Comparative transcriptome analysis of Eogammarus possjeticus at different hydrostatic pressure and temperature exposures.

机构信息

Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya, 572000, China.

University of Chinese Academy of Sciences, Beijing, 100049, China.

出版信息

Sci Rep. 2019 Mar 5;9(1):3456. doi: 10.1038/s41598-019-39716-y.

Abstract

Hydrostatic pressure is an important environmental factor affecting the vertical distribution of marine organisms. Laboratory-based studies have shown that many extant shallow-water marine benthic invertebrates can tolerate hydrostatic pressure outside their known natural distributions. However, only a few studies have focused on the molecular mechanisms of pressure acclimatisation. In the present work, we examined the pressure tolerance of the shallow-water amphipod Eogammarus possjeticus at various temperatures (5, 10, 15, and 20 °C) and hydrostatic pressures (0.1-30 MPa) for 16 h. Six of these experimental groups were used for transcriptome analysis. We found that 100% of E. possjeticus survived under 20 MPa at all temperature conditions for 16 h. Sequence assembly resulted in 138, 304 unigenes. Results of differential expression analysis revealed that 94 well-annotated genes were up-regulated under high pressure. All these findings indicated that the pressure tolerance of E. possjeticus was related to temperature. Several biological processes including energy metabolism, antioxidation, immunity, lipid metabolism, membrane-related process, genetic information processing, and DNA repair are probably involved in the acclimatisation in deep-sea environments.

摘要

静水压力是影响海洋生物垂直分布的一个重要环境因素。基于实验室的研究表明,许多现生的浅海底栖无脊椎动物可以耐受超出其已知自然分布范围的静水压力。然而,只有少数研究关注于压力适应的分子机制。在本工作中,我们在不同温度(5、10、15 和 20°C)和静水压力(0.1-30 MPa)下,用 16 小时时间,研究了浅水十足目端足类动物 Eogammarus possjeticus 的压力耐受性。这六个实验组中的六个被用于转录组分析。我们发现,在所有温度条件下,E. possjeticus 在 20 MPa 下 100%存活 16 小时。序列组装产生了 138 个、304 个基因。差异表达分析的结果表明,94 个注释良好的基因在高压下上调。所有这些发现表明,E. possjeticus 的压力耐受性与温度有关。几种生物学过程,包括能量代谢、抗氧化、免疫、脂质代谢、膜相关过程、遗传信息处理和 DNA 修复,可能参与深海环境的适应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0140/6401005/fa07ee90097f/41598_2019_39716_Fig1_HTML.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验