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对一种稀有蝉的从头比较转录组分析,鉴定了与适应新型宿主植物和干燥生境相关的候选基因。

De novo comparative transcriptome analysis of a rare cicada, with identification of candidate genes related to adaptation to a novel host plant and drier habitats.

机构信息

State Key Laboratory of Crop Stress Biology for Arid Areas, and Key Laboratory of Plant Protection Resources and Pest Management, Ministry of Education, College of Plant Protection, Northwest A&F University, Yangling, 712100, Shaanxi, China.

出版信息

BMC Genomics. 2019 Mar 7;20(1):182. doi: 10.1186/s12864-019-5547-y.

Abstract

BACKGROUND

Although the importance of host plant chemistry in plant-insect interactions is widely recognized, our understanding about the genetic basis underlying the relationship between changes in midgut proteins and adaptation of plant-feeding insects to novel host plants and habitats is very limited. To address this knowledge gap, the transcriptional profiles of midguts among three populations of the cicada Subpsaltria yangi Chen were compared. Among which, the Hancheng (HC) and Fengxiang (FX) populations occurring in the Loess Plateau feed on Ziziphus jujuba Mill. var. spinosa (Bunge) Hu ex H. F. Chow, while the population occurring in a much drier habitat in the Helan (HL) Mountains is locally specialized on a chemically divergent plant, Ephedra lepidosperma C. Y. Cheng.

RESULTS

Based on comparative analysis, 1826 (HL vs HC) differentially expressed genes (DEGs) and 723 DEGs (HL vs FX) were identified between the populations utilizing different host plants, including 20, 36, 2, 5 and 2 genes related to digestion, detoxification, oxidation-reduction, stress response and water-deprivation response, respectively, and 35 genes presumably associated with osmoregulation. However, only 183 DEGs were identified between the HC and FX populations, including two genes related to detoxification, two genes related to stress response, and one gene presumably associated with osmoregulation. These results suggest that the weakest expression differences were between the populations utilizing the same host plant and occurring in the closest habitats, which may help explain the metabolic mechanism of adaptation in S. yangi populations to novel host plants and new niches.

CONCLUSIONS

The observed differences in gene expression among S. yangi populations are consistent with the hypothesis that the host plant shift and habitat adaptation in the HL population was facilitated by differential regulation of genes related to digestion, detoxification, oxidation-reduction, stress response, water-deprivation response and osmoregulation. The results may inform future studies on the molecular mechanisms underlying the relationship between changes in midgut proteins and adaptation of herbivorous insects to novel host plants and new niches.

摘要

背景

尽管宿主植物化学物质在植物-昆虫相互作用中的重要性已被广泛认识,但我们对中肠蛋白变化与植食性昆虫适应新宿主植物和新栖息地之间关系的遗传基础的了解非常有限。为了解决这一知识空白,比较了三种阳彩臂金龟种群的中肠转录谱。其中,发生在黄土高原的韩城(HC)和凤翔(FX)种群以枣(Ziziphus jujuba Mill. var. spinosa(Bunge)Hu ex H. F. Chow)为食,而发生在贺兰山(HL)较干燥生境的种群则专门以一种化学上不同的植物麻黄(Ephedra lepidosperma C. Y. Cheng)为食。

结果

基于比较分析,在利用不同宿主植物的种群之间(HL 与 HC)鉴定出 1826 个(HL 与 FX)差异表达基因(DEGs)和 723 个 DEGs,包括与消化、解毒、氧化还原、应激反应和水分胁迫反应分别相关的 20、36、2、5 和 2 个基因,以及 35 个可能与渗透调节相关的基因。然而,在 HC 和 FX 种群之间仅鉴定出 183 个 DEGs,包括与解毒相关的两个基因、与应激反应相关的两个基因以及一个可能与渗透调节相关的基因。这些结果表明,在利用相同宿主植物和生活在最接近生境的种群之间,表达差异最小,这可能有助于解释阳彩臂金龟种群适应新宿主植物和新生境的代谢机制。

结论

观察到的阳彩臂金龟种群之间的基因表达差异与假设一致,即 HL 种群的宿主植物转移和栖息地适应是通过相关基因的差异调节来促进的,这些基因与消化、解毒、氧化还原、应激反应、水分胁迫反应和渗透调节有关。研究结果可能为未来研究中肠蛋白变化与植食性昆虫适应新宿主植物和新生境的关系的分子机制提供信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f6/6407286/5c1d1a79e11c/12864_2019_5547_Fig1_HTML.jpg

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